Evidence map›Paper›PMID 35258649›Full record

ArticleArchives of virology2022

Construction of full-length infectious clones of turnip mosaic virus isolates infecting Perilla frutescens and genetic analysis of recently emerged strains in Korea.

Zheng-Xing Song, Su-Jeong Chu, Eun-Young Seo, Wen-Xing Hu, Yong Pyo Lim, Tae-Seon Park, Ji-Soo Park, Jin-Sung Hong, In-Sook Cho, John Hammond and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.8field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Zheng-Xing Song *Department of Smart Agriculture Systems, College of Agriculture and Life Sciences, Chungnam National University, Daejeon, 34134, Republic of Korea.
Su-Jeong Chu *Department of Applied Biology, College of Agriculture and Life Sciences, Chungnam National University, Daejeon, 34134, Republic of Korea.
Eun-Young Seo *Department of Applied Biology, College of Agriculture and Life Sciences, Chungnam National University, Daejeon, 34134, Republic of Korea.
Wen-Xing HuDepartment of Applied Biology, College of Agriculture and Life Sciences, Chungnam National University, Daejeon, 34134, Republic of Korea.
Yong Pyo LimDepartment of Horticulture, College of Agriculture and Life Sciences, Chungnam National University, Daejeon, 34134, Republic of Korea.
Tae-Seon ParkInterdisciplinary Program in Smart Agriculture, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Ji-Soo ParkInterdisciplinary Program in Smart Agriculture, Kangwon National University, Chuncheon, 24341, Republic of Korea.
Jin-Sung HongInterdisciplinary Program in Smart Agriculture, Kangwon National University, Chuncheon, 24341, Republic of Korea.
In-Sook ChoNational Institute of Horticultural and Herbal Science, Rural Development Administration, Jeollabuk-do, 55365, Wanju-gun, Republic of Korea. tuat@korea.kr.ORCID http://orcid.org/0000-0001-6436-6771
John HammondUnited States Department of Agriculture-Agricultural Research Service, U.S. National Arboretum, Floral and Nursery Plants Research Unit, Beltsville, MD, 20705, USA. john.hammond@usda.gov.ORCID http://orcid.org/0000-0001-7593-747X
Hyoun-Sub LimDepartment of Smart Agriculture Systems, College of Agriculture and Life Sciences, Chungnam National University, Daejeon, 34134, Republic of Korea. hyounlim@cnu.ac.kr.ORCID http://orcid.org/0000-0001-5690-3864
Chungnam National University · KRKangwon National University · KRAgricultural Research Service · USRural Development Administration · KR

Funding

Rural Development Administration PJ01477603
6 · The paper itself

Abstract

Perilla is an annual herb with a unique aroma and taste that has been cultivated in Korea for hundreds of years. It has been widely cultivated in many Asian and European countries as a food and medicinal crop. Recently, several viruses have been reported to cause diseases in perilla in Korea, including turnip mosaic virus (TuMV), which is known as a brassica pathogen due to its significant damage to brassica crops. In this study, we determined the complete genome sequences of two new TuMV isolates originating from perilla in Korea. Full-length infectious cDNA clones of these two isolates were constructed, and their infectivity was tested by agroinfiltration of Nicotiana benthamiana and sap inoculation of Chinese cabbage and radish plants. In addition, we analyzed the phylogenetic relationship of six new Korean TuMV isolates to members of the four major groups. We also used RDP4 software to conduct recombination analysis of recent isolates from Korea, which provided new insight into the evolutionary relationships of Korean isolates of TuMV.

Indexed as

Perilla frutescensClone CellsPhylogenyPlant DiseasesPotyvirus

Identifiers

PMID35258649
PMCPMC8902734
OpenAlexW4220752302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.