Evidence map›Paper›PMID 35257006›Full record

ArticleResearch and reports in urology2022

MicroRNAs as Potential Liquid Biopsy Biomarker for Patients with Castration-Resistant Prostate Cancer.

Nicolas Fernandez, Julian Chavarriaga, Paola Ayala, Adriana Pedraza, John Bolivar, Juan Guillermo Prada, Juan Guillermo Cataño, Herney Andres García-Perdomo, Juliana Villanueva, Daniela Varela and 1 more

Open access · goldAbstract read
In one paragraph

Article in Research and reports in urology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Nicolas FernandezDivision of Urology Seattle Children's Hospital, University of Washington, Seattle, WA, USA.
Julian ChavarriagaDivision of Urology, Clínica Imbanaco - Quiron Salud, Cali, Colombia.
Paola AyalaHuman Genetics Institute, Pontificia Universidad Javeriana, Bogota, Colombia.ORCID 0000-0002-0141-1149
Adriana PedrazaDivision of Urology Clínica Desa, Cali, Colombia.ORCID 0000-0003-3275-7019
John BolivarDivision of Urology, Department of Surgery, Hospital Universitario San Ignacio, Bogota, Colombia.
Juan Guillermo PradaDivision of Urology, Hospital Universitario San Ignacio, Pontificia Universidad Javeriana, Bogota, Colombia.
Juan Guillermo CatañoDivision of Urology, Hospital Universitario San Ignacio, Pontificia Universidad Javeriana, Bogota, Colombia.ORCID 0000-0001-8202-9744
Herney Andres García-PerdomoDivision of Urology, Department of Surgery, Universidad del Valle, Cali, Colombia.
Juliana VillanuevaDivision of Urology, Hospital Universitario San Ignacio, Pontificia Universidad Javeriana, Bogota, Colombia.ORCID 0000-0002-0700-5686
Daniela VarelaDivision of Urology, Hospital Universitario San Ignacio, Pontificia Universidad Javeriana, Bogota, Colombia.ORCID 0000-0002-3772-6177
Ignacio ZaranteHuman Genetics Institute, Pontificia Universidad Javeriana, Bogota, Colombia.
Pontificia Universidad Javeriana · COClínica Santa María · COHospital Universitario San Ignacio · COSeattle Children's Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: To identify micro-RNAs (miRNAs) expression profiles in peripheral blood plasma that could play a role as potential biomarkers in patients who progressed to castration-resistant prostate cancer (CRPC). Liquid biopsy analysis of miRNAs is a fast-developing field with a considerable likelihood to predict tumor progression and metastasis by targeting genes involved in oncogenesis. Patients and Methods: Differential expression analysis of miRNAs profile in CRPC patients was performed by creating small RNA libraries of circulating miRNAs using HiSeq2500 Illumina platform. A secondary analysis of aligned reads with miRNA identification and quantification was performed using miARmaSeq. Using the Bowtie algorithm, the selected variants were compared to reference nucleotide sequence GRCh38 and miRbase. Novel miRNA sequences were structurally analyzed using mirDeep2 Results: A total of 16 patients with CRPC were included for analysis. Identified circulating miRNAs were hsa-miR-885-3p, hsa-miR-4467, hsa-miR-4686, hsa-miR-146a-3p, hsa-miR-6514-5p. Genes identified as regulated by these miRNAs were Conclusion: We explored the miRNA expression profile in patients with CRPC, identifying five miRNAs implicated in the regulation of genes involved in prostate cancer (PCa) oncogenesis and progression. We also found miRNA 855-3p in peripheral blood for the first time, which has a critical role in tumor growth mechanisms and higher expression profile than in healthy individuals.

Indexed as

biomarkerscastration-resistantgenital neoplasmsmalemicroRNAsprostatic neoplasmprostatic neoplasms

Identifiers

PMID35257006
PMCPMC8898099
OpenAlexW4214664842

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.