Evidence map›Paper›PMID 35256758›Full record

ArticleNature biomedical engineering2022

Field validation of the performance of paper-based tests for the detection of the Zika and chikungunya viruses in serum samples.

Margot Karlikow, Severino Jefferson Ribeiro da Silva, Yuxiu Guo, Seray Cicek, Larissa Krokovsky, Paige Homme, Yilin Xiong, Talia Xu, Maria-Angelica Calderón-Peláez, Sigrid Camacho-Ortega and 19 more

Abstract read
In one paragraph

Article in Nature biomedical engineering, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

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  5. Enzymatic DNA Reaction Networks for Orchestrating Stimuli-Dependent Temporal Molecular Pulse.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  10. Programming Next-Generation Synthetic Biosensors by Genetic Circuit Design.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
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  16. Article
  17. Article
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  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Margot Karlikow *Department of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.
Severino Jefferson Ribeiro da Silva *Department of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ), Recife, Brazil.ORCID http://orcid.org/0000-0002-3779-4727
Yuxiu Guo *Department of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.
Seray Cicek *Department of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.
Larissa Krokovsky *Department of Entomology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ), Recife, Brazil.
Paige HommeDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.
Yilin XiongDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.
Talia XuDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.
Maria-Angelica Calderón-PeláezInstituto de Virologia, Universidad El Bosque, Bogotá, Colombia.
Sigrid Camacho-OrtegaInstituto de Virologia, Universidad El Bosque, Bogotá, Colombia.
Duo MaBiodesign Center for Molecular Design and Biomimetics, The Biodesign Institute and the School of Molecular Sciences, Arizona State University, Tempe, AZ, USA.
Jurandy Júnior Ferraz de MagalhãesDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ), Recife, Brazil.
Bárbara Nayane Rosário Fernandes SouzaDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ), Recife, Brazil.
Diego Guerra de Albuquerque CabralDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ), Recife, Brazil.
Katariina JaenesDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.
Polina SutyrinaDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.
Tom FerranteWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, USA.
Andrea Denisse BenitezInstituto Nacional de Investigación en Salud Pública 'Dr. Leopoldo Izquieta Pérez', Quito, Ecuador.ORCID http://orcid.org/0000-0002-3599-3044
Victoria NipazInstituto Nacional de Investigación en Salud Pública 'Dr. Leopoldo Izquieta Pérez', Quito, Ecuador.
Patricio PonceInstituto Nacional de Investigación en Salud Pública 'Dr. Leopoldo Izquieta Pérez', Quito, Ecuador.
Darius G RackusDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0001-8437-9510
James J CollinsWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, USA.ORCID http://orcid.org/0000-0002-5560-8246
Marcelo PaivaDepartment of Entomology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ), Recife, Brazil.
Jaime E CastellanosInstituto de Virologia, Universidad El Bosque, Bogotá, Colombia.
Varsovia CevallosInstituto Nacional de Investigación en Salud Pública 'Dr. Leopoldo Izquieta Pérez', Quito, Ecuador.ORCID http://orcid.org/0000-0001-8666-1536
Alexander A GreenDepartment of Biomedical Engineering, Boston University, Boston, MA, USA.ORCID http://orcid.org/0000-0003-2058-1204
Constância AyresDepartment of Entomology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ), Recife, Brazil.
Lindomar PenaDepartment of Virology, Aggeu Magalhães Institute, Oswaldo Cruz Foundation (FIOCRUZ), Recife, Brazil.
Keith PardeeDepartment of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada. keith.pardee@utoronto.ca.ORCID http://orcid.org/0000-0002-3812-8013

Funding

Molecular Fuses for Real-Time, Label-Free, Multiplexed Imaging of RNAs in Living CellsDP2GM126892 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI GREEN, ALEXANDER ARTHUR · 2017 to 2017
$2.3M
Programmable electrochemical gene circuit sensors for infectious disease detectionR21AI136571 · NIAID · UNIVERSITY OF TORONTO · PI GREEN, ALEXANDER ARTHUR, KELLEY, SHANA O · 2018 to 2019
$300k
CIHR 149783CIHR 201610FDN-375469NIAID NIH HHS R21 AI136571NIGMS NIH HHS DP2 GM126892
6 · The paper itself

Abstract

In low-resource settings, resilience to infectious disease outbreaks can be hindered by limited access to diagnostic tests. Here we report the results of double-blinded studies of the performance of paper-based diagnostic tests for the Zika and chikungunya viruses in a field setting in Latin America. The tests involved a cell-free expression system relying on isothermal amplification and toehold-switch reactions, a purpose-built portable reader and onboard software for computer vision-enabled image analysis. In patients suspected of infection, the accuracies and sensitivities of the tests for the Zika and chikungunya viruses were, respectively, 98.5% (95% confidence interval, 96.2-99.6%, 268 serum samples) and 98.5% (95% confidence interval, 91.7-100%, 65 serum samples) and approximately 2 aM and 5 fM (both concentrations are within clinically relevant ranges). The analytical specificities and sensitivities of the tests for cultured samples of the viruses were equivalent to those of the real-time quantitative PCR. Cell-free synthetic biology tools and companion hardware can provide de-centralized, high-capacity and low-cost diagnostics for use in low-resource settings.

Indexed as

Chikungunya FeverChikungunya virusDengueZika VirusZika Virus InfectionHumans

Identifiers

PMID35256758
PMCPMC8940623

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.