Evidence map›Paper›PMID 35256624›Full record

ArticleScientific reports2022

A red fluorescent protein with improved monomericity enables ratiometric voltage imaging with ASAP3.

Benjamin B Kim, Haodi Wu, Yukun A Hao, Michael Pan, Mariya Chavarha, Yufeng Zhao, Michael Westberg, François St-Pierre, Joseph C Wu, Michael Z Lin

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Absolute voltage mapping using dynamic photocycle control.bioRxiv : the preprint server for biology · 2026
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  5. Review
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  9. Virtual blebbistatin: A robust and rapid software approach to motion artifact removal in optical mapping of cardiomyocytes.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Review
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Benjamin B KimDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Haodi WuStanford Cardiovascular Institute, Stanford University, Stanford, USA.
Yukun A HaoDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Michael PanDepartment of Neurobiology, Stanford University, Stanford, CA, USA.
Mariya ChavarhaDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Yufeng ZhaoDepartment of Neurobiology, Stanford University, Stanford, CA, USA.
Michael WestbergDepartment of Neurobiology, Stanford University, Stanford, CA, USA.
François St-PierreBaylor College of Medicine, Houston, TX, USA.
Joseph C WuStanford Cardiovascular Institute, Stanford University, Stanford, USA.
Michael Z LinDepartment of Bioengineering, Stanford University, Stanford, CA, USA. mzlin@stanford.edu.

Funding

Genome Editing of Human iPSCs to Study Inherited Hypertrophic CardiomyopathyR01HL126527 · NHLBI · STANFORD UNIVERSITY · PI QI, LEI STANLEY, WU, JOSEPH C. · 2015 to 2022
$5.4M
The power of positivity: a novel class of voltage indicators for high-fidelity brain activity imagingR01NS123681 · NINDS · STANFORD UNIVERSITY · PI LIN, MICHAEL Z. · 2021 to 2021
$3.6M
Bringing laser focus to voltage imaging: Enhanced indicators and advanced scanning methods for two-photon recording of dense networks in vivoU01NS103464 · NINDS · STANFORD UNIVERSITY · PI DIEUDONNE, STEPHANE, LIN, MICHAEL Z. · 2017 to 2019
$2.9M
Revealing circuit control of neuronal excitation with next-generation voltage indicatorsRF1MH114105 · NIMH · STANFORD UNIVERSITY · PI CLANDININ, THOMAS ROBERT, LIN, MICHAEL Z. · 2017 to 2017
$2.9M
Protein voltage sensors: kilohertz imaging of neural dynamics in behaving animalsU01NS090600 · NINDS · STANFORD UNIVERSITY · PI LIN, MICHAEL Z., SCHNITZER, MARK J · 2014 to 2016
$2.8M
Molecular Imaging of Cardiac Pluripotent Stem CellsR01HL133272 · NHLBI · STANFORD UNIVERSITY · PI WU, JOSEPH C. · 2016 to 2020
$2.4M
Epigenetic regulation of PDE signaling in dilated cardiomyopathyR00HL133473 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WU, HAODI · 2021 to 2023
$747k
Epigenetic regulation of PDE signaling in dilated cardiomyopathyK99HL133473 · NHLBI · STANFORD UNIVERSITY · PI WU, HAODI · 2017 to 2018
$223k
NHLBI NIH HHS K99 HL133473NHLBI NIH HHS R00 HL133473NHLBI NIH HHS R01 HL126527NHLBI NIH HHS R01 HL133272NIH HHS 1R01HL133272NIH HHS 1R01NS123681NIH HHS K99 HL133473NIH HHS R01HL126527NIMH NIH HHS RF1 MH114105NINDS NIH HHS R01 NS123681NINDS NIH HHS U01 NS090600NINDS NIH HHS U01 NS103464
6 · The paper itself

Abstract

A ratiometric genetically encoded voltage indicator (GEVI) would be desirable for tracking transmembrane voltage changes in the presence of sample motion. We performed combinatorial multi-site mutagenesis on a cyan-excitable red fluorescent protein to create the bright and monomeric mCyRFP3, which proved to be uniquely non-perturbing when fused to the GEVI ASAP3. The green/red ratio from ASAP3-mCyRFP3 (ASAP3-R3) reported voltage while correcting for motion artifacts, allowing the visualization of membrane voltage changes in contracting cardiomyocytes and throughout the cell cycle of motile cells.

Indexed as

Diagnostic ImagingNeuronsLuminescent ProteinsMutagenesisRed Fluorescent ProteinLuminescent ProteinsRed Fluorescent Protein

Identifiers

PMID35256624
PMCPMC8901740

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.