Evidence map›Paper›PMID 35256015›Full record

ArticleIMA fungus2022

Black fungi and ants: a genomic comparison of species inhabiting carton nests versus domatia.

Yu Quan, Nickolas Menezes da Silva, Bruna Jacomel Favoreto de Souza Lima, Sybren de Hoog, Vania Aparecida Vicente, Veronika Mayer, Yingqian Kang, Dongmei Shi

Open access · goldAbstract read
In one paragraph

Article in IMA fungus, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Yu QuanCenter of Expertise in Mycology of Radboud University Medical Center/Canisius Wilhelmina Hospital, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0002-3103-3118
Nickolas Menezes da SilvaDepartment of Botany and Biodiversity Research, University of Vienna, Wien, Austria.
Bruna Jacomel Favoreto de Souza LimaGraduate Program in Microbiology, Parasitology and Pathology, Biological Sciences, Department of Basic Pathology, Federal University of Paraná, Curitiba, Brazil.
Sybren de HoogCenter of Expertise in Mycology of Radboud University Medical Center/Canisius Wilhelmina Hospital, Nijmegen, The Netherlands.
Vania Aparecida VicenteGraduate Program in Microbiology, Parasitology and Pathology, Biological Sciences, Department of Basic Pathology, Federal University of Paraná, Curitiba, Brazil.
Veronika MayerDepartment of Botany and Biodiversity Research, University of Vienna, Wien, Austria.
Yingqian KangKey Laboratory of Environmental Pollution Monitoring and Disease Control, Ministry of Education of Guizhou and Guizhou Talent Base for Microbiology and Human Health, School of Basic Medical Sciences, Guizhou Medical University, Guiyang, China. 449164105@qq.com.
Dongmei ShiDepartment of Dermatology and Laboratory of Medical Mycology, Jining No. 1 People's Hospital, Shandong, China. shidongmei28@163.com.
Radboud University Nijmegen · NLUniversidade Federal do Paraná · BRUniversity of Vienna · ATGuiyang Medical University · CNJining First People's Hospital · CN

Funding

Guizhou Scientific Plan Project (2019) 2873Guizhou Scientific Plan Project [2020]4Y220International Science and Technology Cooperation Base of Guizhou Province [2020]4101National Natural Science Foundation of China 32060034Talent Base Project of Guizhou Province FCJD2018-22
6 · The paper itself

Abstract

Some members of Chaetothyriales, an order containing potential agents of opportunistic infections in humans, have a natural habitat in nests of tropical arboreal ants. In these black fungi, two types of ant symbiosis are known, i.e. occurrence in domatia inside living plants, or as components of carton constructions made of ant-chewed plant tissue. In order to explain differences between strains from these types of association, we sequenced and annotated genomes of two newly described carton species, Incumbomyces lentus and Incumbomyces delicatus, and compared these with genomes of four domatia species and related Chaetothyriales. General genomic characteristics, CYP genes, carbohydrate-active enzymes (CAZymes), secondary metabolism, and sex-related genes were included in the study.

Indexed as

Black fungiCarton fungiChaetothyrialesComparative genomics

Identifiers

PMID35256015
PMCPMC8900376
OpenAlexW4220658557

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.