ArticleBMC genomics2022
Identification of TIFY gene family in walnut and analysis of its expression under abiotic stresses.
Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed, 32 citations in OpenAlex.
- Genome-wide identification and characterization of GATA transcription factors in Avena sativa L. and expression profiling under salinity stress.Journal of applied genetics · 2026Article
- Insights into physiological, biochemical and molecular mechanisms of abiotic stress tolerance in Persian walnut (Juglans regia L.).Protoplasma · 2026Review
- Genome-wide analysis of Alfalfa AP2/ERF gene family and abiotic stress response.Frontiers in plant science · 2026Article
- Genome-wide identification, characterization, and expression profiling of TIFY family members in Panax notoginseng.BMC genomics · 2025Article
- Genome-Wide Identification and Expressional Analysis of theInternational journal of molecular sciences · 2025Article
- Genome-wide identification of the TIFY gene family in Helianthus annuus and expression analysis in response to drought and salt stresses.Scientific reports · 2025Article
- Article
- Genome-wide identification, characterization and expression pattern analysis of TIFY family members in Artemisia argyi.BMC genomics · 2024Article
- Genome-wide identification and comprehensive analysis of the AP2/ERF gene family in Prunus sibirica under low-temperature stress.BMC plant biology · 2024Article
- Genome-wide identification and expression analysis of the Eriobotrya japonica TIFY gene family reveals its functional diversity under abiotic stress conditions.BMC genomics · 2024Article
- Decrypting Molecular Mechanisms Involved in Counteracting Copper and Nickel Toxicity in Jack Pine (Plants (Basel, Switzerland) · 2024Article
- Genome-wide identification and expression analysis ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2024Article
- New Insights into the TIFY Gene Family ofInternational journal of molecular sciences · 2023Article
- Genome-Wide Identification of KiwifruitInternational journal of molecular sciences · 2023Article
- Genome-wide identification of long non-coding RNAs and their potential functions in radish response to salt stress.Frontiers in genetics · 2023Article
- Genome-Wide Identification of theInternational journal of molecular sciences · 2022Article
- Genome-wide identification and expression of TIFY family in cassava (Frontiers in plant science · 2022Article
- Insights into the regulation of wild soybean tolerance to salt-alkaline stress.Frontiers in plant science · 2022Review
Corrections and comments
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
Abstract
backgroundWalnuts (Juglans regia L.) are known for their nutrient-rich nuts and are one of the important economic tree species in the world. However, due to global warming and soil salinization, walnuts suffer from various abiotic stresses. TIFY (TIF[F/Y]XG) proteins play an essential role in the growth and development of plants, signal transduction, and stress response in plants. At present, although the TIFY gene family of a number of plants has been identified and studied, how TIFY takes part in stress tolerance remains obscure and many functions of TIFY require further investigation.
resultIn this study, twenty-one TIFY transcription factors were identified in the walnut genome database, and they were divided into four subfamilies (TIFY, JAZ, ZML, and PPD) by bioinformatics analysis. Chromosome location revealed tandem duplication of some genes. Phylogenetic tree analysis showed JrTIFYs were closely related to the TIFY gene family of Arabidopsis thaliana (A. thaliana). qRT-PCR (quantitative real-time PCR) analysis revealed the TIFY genes have different expression patterns in 'Qingxiang' and 'Xiangling' walnut varieties under drought, heat, and salt stress. JAZ subfamily was more expressed in different abiotic stress than other subfamilies. The expressions of JrTIFY14 under heat and salt stress were significantly higher than those under drought stress. However, the expression of JrTIFYs was not significant in 'Xiangling'.
conclusionThis study reveals the TIFY gene family plays an important role in walnuts facing abiotic stresses and provides a theoretical basis for walnut breeding.
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