Evidence map›Paper›PMID 35255815›Full record

ArticleBMC plant biology2022

ROS1-mediated decrease in DNA methylation and increase in expression of defense genes and stress response genes in Arabidopsis thaliana due to abiotic stresses.

Liping Yang, Chenjing Lang, Yanju Wu, Dawei Meng, Tianbo Yang, Danqi Li, Taicheng Jin, Xiaofu Zhou

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
8.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Regulatory Landscapes of Non-Coding RNAs During Drought Stress in Plants.International journal of molecular sciences · 2025
    Review
  8. DNA Methylation in Rice: Mechanisms, Regulatory Roles, and Beyond.International journal of molecular sciences · 2025
    Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Identification ofGenes · 2025
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Systematic Analysis of DNA Demethylase Gene Families in Foxtail Millet (International journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Liping YangThe School of Life Sciences, Jilin Normal University, Siping, China.
Chenjing LangThe School of Life Sciences, Jilin Normal University, Siping, China.
Yanju WuThe School of Life Sciences, Jilin Normal University, Siping, China.
Dawei MengThe School of Life Sciences, Jilin Normal University, Siping, China.
Tianbo YangThe School of Life Sciences, Northwest A&F University, Xianyang, Shanxi, China.
Danqi LiThe School of Life Sciences, Jilin University, Changchun, China.
Taicheng JinThe School of Life Sciences, Jilin Normal University, Siping, China. jintaicheng2535@163.com.
Xiaofu ZhouThe School of Life Sciences, Jilin Normal University, Siping, China. yangliping781124@163.com.
Jilin Normal University · CNJilin University · CNNorthwest A&F University · CN

Funding

National Natural Science Foundation of China Grant Number 31301043the Department of Finance of Jilin Province Grant Number JJKH20191013KJ
6 · The paper itself

Abstract

backgroundSmall interfering RNAs (siRNAs) target homologous genomic DNA sequences for cytosine methylation, known as RNA-directed DNA methylation (RdDM), plays an important role in transposon control and regulation of gene expression in plants. Repressor of silencing 1 (ROS1) can negatively regulate the RdDM pathway.

resultsIn this paper, we investigated the molecular mechanisms by which an upstream regulator ACD6 in the salicylic acid (SA) defense pathway, an ABA pathway-related gene ACO3, and GSTF14, an endogenous gene of the glutathione S-transferase superfamily, were induced by various abiotic stresses. The results demonstrated that abiotic stresses, including water deficit, cold, and salt stresses, induced demethylation of the repeats in the promoters of ACD6, ACO3, and GSTF14 and transcriptionally activated their expression. Furthermore, our results revealed that ROS1-mediated DNA demethylation plays an important role in the process of transcriptional activation of ACD6 and GSTF14 when Arabidopsis plants are subjected to cold stress.

conclusionsThis study revealed that ROS1 plays an important role in the molecular mechanisms associated with genes involved in defense pathways in response to abiotic stresses.

Indexed as

Adaptation, PhysiologicalArabidopsisCold-Shock ResponseDehydrationDNA MethylationGene Expression Regulation, PlantGene SilencingGenes, PlantMetabolic Networks and PathwaysPlants, Genetically ModifiedReactive Oxygen SpeciesSalt StressReactive Oxygen SpeciesAbiotic stressesDNA methylationROS1-mediated DNA demethylationSalicylic acid

Identifiers

PMID35255815
PMCPMC8903643
OpenAlexW4221086258

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.