Evidence map›Paper›PMID 35254413›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2022

Comprehensive Analysis of R-Spondin Fusions and RNF43 Mutations Implicate Novel Therapeutic Options in Colorectal Cancer.

Andreas Seeber, Francesca Battaglin, Kai Zimmer, Florian Kocher, Yasmine Baca, Joanne Xiu, Gilbert Spizzo, Veronica Novotny-Diermayr, Dietmar Rieder, Alberto Puccini and 18 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
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  5. Review
  6. Article
  7. World journal of gastrointestinal oncology · 2025
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  8. Article
  9. Define a good prognosis ofFrontiers in oncology · 2025
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  15. Clinical and molecular characteristics ofTherapeutic advances in medical oncology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 12 institutions in 5 countries.

Andreas Seeber *Department of Hematology and Oncology, Comprehensive Cancer Center Innsbruck, Medical University of Innsbruck, Innsbruck, Austria.ORCID 0000-0001-8529-7824
Francesca Battaglin *Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, California.
Kai Zimmer *Department of Hematology and Oncology, Comprehensive Cancer Center Innsbruck, Medical University of Innsbruck, Innsbruck, Austria.ORCID 0000-0002-1357-8712
Florian Kocher *Department of Hematology and Oncology, Comprehensive Cancer Center Innsbruck, Medical University of Innsbruck, Innsbruck, Austria.
Yasmine BacaCaris Life Sciences, Phoenix, Arizona.
Joanne XiuCaris Life Sciences, Phoenix, Arizona.
Gilbert SpizzoDepartment of Hematology and Oncology, Comprehensive Cancer Center Innsbruck, Medical University of Innsbruck, Innsbruck, Austria.
Veronica Novotny-DiermayrExperimental Drug Development Center (EDDC), A*Star, Singapore.
Dietmar RiederBiocenter, Institute of Bioinformatics, Medical University of Innsbruck, Innsbruck, Austria.ORCID 0000-0003-1754-690X
Alberto PucciniOncologia Medica 1, Ospedale Policlinico San Martino-IRCCS, Genova, Italy.ORCID 0000-0002-2492-4043
Jeff SwensenCaris Life Sciences, Phoenix, Arizona.
Michelle EllisCaris Life Sciences, Phoenix, Arizona.ORCID 0000-0002-6517-9932
Richard M GoldbergWest Virginia University Cancer Institute, Morgantown, West Virginia.ORCID 0000-0003-0308-8223
Axel GrotheyWest Cancer Center, Germantown, Tennessee.
Anthony F ShieldsDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, Michigan.ORCID 0000-0002-9122-1014
John L MarshallRuesch Center for The Cure of Gastrointestinal Cancers, Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington, DC.ORCID 0000-0002-3449-2344
Benjamin A WeinbergRuesch Center for The Cure of Gastrointestinal Cancers, Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington, DC.ORCID 0000-0002-0408-4817
Paul E SacksteinRuesch Center for The Cure of Gastrointestinal Cancers, Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington, DC.
Kiat Hon LimDepartment of Molecular Pathology, Translational Pathology Center, Singapore General Hospital, Singapore.
Gek San TanDepartment of Molecular Pathology, Translational Pathology Center, Singapore General Hospital, Singapore.
Chadi NabhanCaris Life Sciences, Phoenix, Arizona.
W Michael KornCaris Life Sciences, Phoenix, Arizona.ORCID 0000-0002-0124-6841
Arno AmannDepartment of Hematology and Oncology, Comprehensive Cancer Center Innsbruck, Medical University of Innsbruck, Innsbruck, Austria.
Zlatko TrajanoskiBiocenter, Institute of Bioinformatics, Medical University of Innsbruck, Innsbruck, Austria.
Martin D BergerDepartment of Medical Oncology, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland.ORCID 0000-0001-9224-7104
Emil LouDivision of Hematology and Oncology, University of Minnesota, Minneapolis, Minnesota.ORCID 0000-0002-1607-1386
Dominik WolfDepartment of Hematology and Oncology, Comprehensive Cancer Center Innsbruck, Medical University of Innsbruck, Innsbruck, Austria.
Heinz-Josef LenzNorris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, California.ORCID 0000-0003-2178-9568
Innsbruck Medical University · ATCaris Life Sciences (United States) · USGeorgetown University · USSingapore General Hospital · SGUniversity of Southern California · USExperimental Drug Development Centre · SGOspedale Policlinico San Martino · ITThe Barbara Ann Karmanos Cancer Institute · USUniversity Hospital of Bern · CHUniversity of Minnesota · USWest Cancer Center · USWest Virginia University · US

Funding

USC/NORRIS COMPREHENSIVE CANCER CENTER (CORE) SUPPORTP30CA014089 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MYLES G COCKBURN · 1985 to 2026
$181.4M
NCI NIH HHS P30 CA014089
6 · The paper itself

Abstract

purposeGene fusions involving R-spondin (RSPOfp) and RNF43 mutations have been shown to drive Wnt-dependent tumor initiation in colorectal cancer. Herein, we aimed to characterize the molecular features of RSPOfp/RNF43 mutated (mut) compared with wild-type (WT) colorectal cancers to gain insights into potential rationales for therapeutic strategies. EXPERIMENTAL

designA discovery cohort was classified for RSPOfp/RNF43 status using DNA/RNA sequencing and IHC. An independent cohort was used to validate our findings.

resultsThe discovery cohort consisted of 7,245 colorectal cancer samples. RSPOfp and RNF43 mutations were detected in 1.3% (n = 94) and 6.1% (n = 443) of cases. We found 5 RSPO fusion events that had not previously been reported (e.g., IFNGR1-RSPO3). RNF43-mut tumors were associated with right-sided primary tumors. No RSPOfp tumors had RNF43 mutations. In comparison with WT colorectal cancers, RSPOfp tumors were characterized by a higher frequency of BRAF, BMPR1A, and SMAD4 mutations. APC mutations were observed in only a minority of RSPOfp-positive compared with WT cases (4.4% vs. 81.4%). Regarding RNF43 mutations, a higher rate of KMT2D and BRAF mutations were detectable compared with WT samples. Although RNF43 mutations were associated with a microsatellite instability (MSI-H)/mismatch repair deficiency (dMMR) phenotype (64.3%), and a tumor mutation burden ≥10 mt/Mb (65.8%), RSPOfp was not associated with MSI-H/dMMR. The validation cohort replicated our genetic findings.

conclusionsThis is the largest series of RSPOfp/RNF43-mut colorectal cancers reported to date. Comprehensive molecular analyses asserted the unique molecular landscape associated with RSPO/RNF43 and suggested potential alternative strategies to overcome the low clinical impact of Wnt-targeted agents and immunotherapy.

Indexed as

Colorectal NeoplasmsProto-Oncogene Proteins B-rafHumansMicrosatellite InstabilityMutationUbiquitin-Protein LigasesProto-Oncogene Proteins B-rafRNF43 protein, humanUbiquitin-Protein Ligases

Identifiers

PMID35254413
PMCPMC9064897
OpenAlexW4220711346

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.