Evidence map›Paper›PMID 35247568›Full record

ArticleBiochimica et biophysica acta. Molecular and cell biology of lipids2022

Inositol depletion regulates phospholipid metabolism and activates stress signaling in HEK293T cells.

Mahmoud Suliman, Kendall C Case, Michael W Schmidtke, Pablo Lazcano, Chisom J Onu, Miriam L Greenberg

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Molecular and cell biology of lipids, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Inositol biosynthesis is inversely regulated by glycolytic activity.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2026
    Article
  2. Article
  3. Review
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  6. Biallelic Loss-of-Function Variant inInternational journal of molecular sciences · 2025
    Article
  7. Article
  8. Divergent Molecular Responses to Heavy Water inPlants (Basel, Switzerland) · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Mahmoud SulimanDepartment of Biological Sciences, Wayne State University, Detroit, MI 48202, United States of America.
Kendall C CaseDepartment of Biological Sciences, Wayne State University, Detroit, MI 48202, United States of America.
Michael W SchmidtkeDepartment of Biological Sciences, Wayne State University, Detroit, MI 48202, United States of America.
Pablo LazcanoDepartment of Biological Sciences, Wayne State University, Detroit, MI 48202, United States of America.
Chisom J OnuDepartment of Biological Sciences, Wayne State University, Detroit, MI 48202, United States of America.
Miriam L GreenbergDepartment of Biological Sciences, Wayne State University, Detroit, MI 48202, United States of America. Electronic address: mgreenberg@wayne.edu.
Wayne State University · US

Funding

Novel Mechanisms of Regulation of Inositol BiosynthesisR01GM125082 · NIGMS · WAYNE STATE UNIVERSITY · PI GREENBERG, MIRIAM L · 2017 to 2020
$1.5M
NIGMS NIH HHS R01 GM125082
6 · The paper itself

Abstract

Inositol plays a significant role in cellular function and signaling. Studies in yeast have demonstrated an "inositol-less death" phenotype, suggesting that inositol is an essential metabolite. In yeast, inositol synthesis is highly regulated, and inositol levels have been shown to be a major metabolic regulator, with its abundance affecting the expression of hundreds of genes. Abnormalities in inositol metabolism have been associated with several human disorders. Despite its importance, very little is known about the regulation of inositol synthesis and the pathways regulated by inositol in human cells. The current study aimed to address this knowledge gap. Knockout of ISYNA1 (encoding myo-inositol-3-P synthase 1) in HEK293T cells generated a human cell line that is deficient in de novo inositol synthesis. ISYNA1-KO cells exhibited inositol-less death when deprived of inositol. Lipidomic analysis identified inositol deprivation as a global regulator of phospholipid levels in human cells, including downregulation of phosphatidylinositol (PI) and upregulation of the phosphatidylglycerol (PG)/cardiolipin (CL) branch of phospholipid metabolism. RNA-Seq analysis revealed that inositol deprivation induced substantial changes in the expression of genes involved in cell signaling, including extracellular signal-regulated kinase (ERK), and genes controlling amino acid transport and protein processing in the endoplasmic reticulum (ER). This study provides the first in-depth characterization of the effects of inositol deprivation on phospholipid metabolism and gene expression in human cells, establishing an essential role for inositol in maintaining cell viability and regulating cell signaling and metabolism.

Indexed as

InositolSaccharomyces cerevisiaeHEK293 CellsHumansPhosphatidylinositolsSignal TransductionInositolPhosphatidylinositolsERKInositolISYNA1Lipid metabolismPhosphatidylinositolPhospholipid

Identifiers

PMID35247568
PMCPMC9070113
OpenAlexW4214886859

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.