Evidence map›Paper›PMID 35246732›Full record

ArticleArchives of virology2022

Temporal expression of defence and susceptibility genes and tospovirus accumulation in capsicum chlorosis virus-infected capsicum.

Fernanda Yuri Borges Naito, Shirani Manel Kumari Widana Gamage, Neena Mitter, Ralf Georg Dietzgen

Open access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Fernanda Yuri Borges NaitoQueensland Alliance for Agriculture and Food Innovation, Centre for Horticultural Science, The University of Queensland, St. Lucia, QLD, 4072, Australia.
Shirani Manel Kumari Widana GamageDepartment of Botany, University of Ruhuna, Matara, Sri Lanka.
Neena MitterQueensland Alliance for Agriculture and Food Innovation, Centre for Horticultural Science, The University of Queensland, St. Lucia, QLD, 4072, Australia.
Ralf Georg DietzgenQueensland Alliance for Agriculture and Food Innovation, Centre for Horticultural Science, The University of Queensland, St. Lucia, QLD, 4072, Australia. r.dietzgen@uq.edu.au.ORCID http://orcid.org/0000-0002-7772-2250
The University of Queensland · AUUniversity of Ruhuna · LK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yolo Wonder (YW) and Warlock (W), two capsicum cultivars that are susceptible to capsicum chlorosis virus (CaCV), were compared in terms of symptom development, tospovirus accumulation, and host gene expression during the first 12 days post infection (dpi). Temporal expression of selected early CaCV-response genes was used to gain insights into plant-virus interactions and to identify potential targets for CaCV control. Symptoms developed faster in YW during the first seven days of infection, while systemic symptoms were similar in both cultivars at 10 and 12 dpi. CaCV accumulation was higher in YW at 7 dpi despite a lower titre at 3 dpi. At 12 dpi, virus accumulation was similar for both cultivars. Symptom development appears to be correlated to virus accumulation over time for both cultivars. Chalcone synthase (CHS), cytochrome P450 (CYP), and tetraspanin 8-like (TSP8) genes followed a similar expression pattern over time in both cultivars. The thionin gene showed increased expression in CaCV-infected plants at 12 dpi. The WRKY40 gene showed significant differential expression at all time points in YW, but only at 12 dpi in W. The strongest correlation of temporal gene expression and virus titre was seen for CYP, TSP8, thionin, and WRKY40. CHS and CYP may be involved in symptom development, and TSP8 may be involved in virus movement. CHS, CYP, and TSP8 may be good targets for future overexpression or silencing studies to clarify their functions during virus infection and, potentially, for control of CaCV in capsicum.

Indexed as

Anemia, HypochromicCapsicumPlant VirusesTospovirusViruses, UnclassifiedPlant Diseases

Identifiers

PMID35246732
PMCPMC8964570
OpenAlexW4214823093

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.