Evidence map›Paper›PMID 35245552›Full record

ArticleThe Science of the total environment2022

Model-based assessment of COVID-19 epidemic dynamics by wastewater analysis.

Daniele Proverbio, Françoise Kemp, Stefano Magni, Leslie Ogorzaly, Henry-Michel Cauchie, Jorge Gonçalves, Alexander Skupin, Atte Aalto

Abstract read
In one paragraph

Article in The Science of the total environment, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  13. Wastewater-based reproduction numbers and projections of COVID-19 cases in three areas in Japan, November 2021 to December 2022.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Daniele ProverbioUniversity of Luxembourg, Luxembourg Centre for Systems Biomedicine, 6 av. du Swing, Belvaux 4376, Luxembourg.
Françoise KempUniversity of Luxembourg, Luxembourg Centre for Systems Biomedicine, 6 av. du Swing, Belvaux 4376, Luxembourg.
Stefano MagniUniversity of Luxembourg, Luxembourg Centre for Systems Biomedicine, 6 av. du Swing, Belvaux 4376, Luxembourg.
Leslie OgorzalyLuxembourg Institute of Science and Technology, Environmental Research and Innovation Department, Belvaux 4422, Luxembourg.
Henry-Michel CauchieLuxembourg Institute of Science and Technology, Environmental Research and Innovation Department, Belvaux 4422, Luxembourg.
Jorge GonçalvesUniversity of Luxembourg, Luxembourg Centre for Systems Biomedicine, 6 av. du Swing, Belvaux 4376, Luxembourg; University of Cambridge, Department of Plant Sciences, Downing St, Cambridge CB2 3EA, UK.
Alexander SkupinUniversity of Luxembourg, Luxembourg Centre for Systems Biomedicine, 6 av. du Swing, Belvaux 4376, Luxembourg; University of Luxembourg, Department of Physics and Materials Science, 162a av. de la Faïencerie, Luxembourg 1511, Luxembourg; University of California San Diego, 9500 Gilman Dr, La Jolla, CA 92093, USA.
Atte AaltoUniversity of Luxembourg, Luxembourg Centre for Systems Biomedicine, 6 av. du Swing, Belvaux 4376, Luxembourg. Electronic address: atte.aalto@uni.lu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Continuous surveillance of COVID-19 diffusion remains crucial to control its diffusion and to anticipate infection waves. Detecting viral RNA load in wastewater samples has been suggested as an effective approach for epidemic monitoring and the development of an effective warning system. However, its quantitative link to the epidemic status and the stages of outbreak is still elusive. Modelling is thus crucial to address these challenges. In this study, we present a novel mechanistic model-based approach to reconstruct the complete epidemic dynamics from SARS-CoV-2 viral load in wastewater. Our approach integrates noisy wastewater data and daily case numbers into a dynamical epidemiological model. As demonstrated for various regions and sampling protocols, it quantifies the case numbers, provides epidemic indicators and accurately infers future epidemic trends. Following its quantitative analysis, we also provide recommendations for wastewater data standards and for their use as warning indicators against new infection waves. In situations of reduced testing capacity, our modelling approach can enhance the surveillance of wastewater for early epidemic prediction and robust and cost-effective real-time monitoring of local COVID-19 dynamics.

Indexed as

COVID-19HumansRNA, ViralSARS-CoV-2WastewaterWastewater-Based Epidemiological MonitoringRNA, ViralWastewaterCOVID-19Early warning systemEpidemiological modellingKalman filterSurveillance of wastewater for early epidemic prediction (SWEEP)Wastewater-based epidemiology

Identifiers

PMID35245552
PMCPMC8886713

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.