Evidence map›Paper›PMID 35245307›Full record

ArticlePloS one2022

Effect of cryopreservation on A172 and U251 glioma cells infected with lentiviral vectors designed for CRISPR/Cas9-mediated aquaporin-8 knock-out.

Hao Zhang, Shujuan Zhu, Yu Xing, Qian Liu, Zhen Guo, Ziling Cai, Zihao Shen, Qingqian Xia, Huajun Sheng

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Hao ZhangDepartment of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.
Shujuan ZhuDepartment of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.
Yu XingDepartment of Forensic Medicine, Chongqing Medical University, Chongqing, China.
Qian LiuDepartment of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.
Zhen GuoDepartment of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.
Ziling CaiDepartment of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.
Zihao ShenDepartment of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.
Qingqian XiaDepartment of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.
Huajun ShengDepartment of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.
Chongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among the three existing targeted gene editing technologies, zinc-finger nucleases, transcription activator-like effector nucleases, and clustered regularly interspaced short palindromic repeats-CRISPR-associated 9 (CRISPR-Cas9), the latter is widely used owing to its simplicity, efficiency, and low cost. Here, we routinely infected A172 and U251 cells with lentiviral vectors, in which aquaporin-8 (AQP8) was knocked out using CRISPR/Cas9. Our results indicated that cryopreservation did not significantly alter the viral infection efficiency, but influenced AQP8 expression in the infected cells at both protein and mRNA levels compared with the non-cryopreserved samples. Further, AQP8 expression at protein and mRNA levels in recovered cryopreserved infected cells did not significantly differ from those in the blank and negative controls, indicating that the lentivirus was still infectious at low temperatures. However, it failed to release the AQP8-targeting guide RNA in the infected cells, or the guide RNA was released, but underwent changes that caused it to malfunction in the cells with CRISPR/Cas9-mediated AQP8 knock-out. Our findings possibly provide some insights into the reliability of lentiviruses as CRISPR/Cas9 vectors.

Indexed as

AquaporinsGliomaCRISPR-Cas SystemsCryopreservationGene EditingHumansLentivirusReproducibility of ResultsRNA, Guide, CRISPR-Cas SystemsRNA, Messengeraquaporin 8AquaporinsRNA, Guide, CRISPR-Cas SystemsRNA, Messenger

Identifiers

PMID35245307
PMCPMC8896708
OpenAlexW4214873062

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.