Evidence map›Paper›PMID 35244768›Full record

ArticleJournal of gastroenterology2022

Upregulation of BMI1-suppressor miRNAs (miR-200c, miR-203) during terminal differentiation of colon epithelial cells.

Shigeo Hisamori, Junko Mukohyama, Sanjay Koul, Takanori Hayashi, Michael Evan Rothenberg, Masao Maeda, Taichi Isobe, Luis Enrique Valencia Salazar, Xin Qian, Darius Michael Johnston and 8 more

Open access · greenAbstract read
In one paragraph

Article in Journal of gastroenterology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 2 countries.

Shigeo Hisamori *Institute for Stem Cell Biology and Regenerative Medicine, Stanford University, Stanford, CA, 94305, USA.
Junko Mukohyama *Department of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Sanjay Koul *Department of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Takanori Hayashi *Department of Biochemistry, Fujita Health University School of Medicine, Toyoake, Aichi, 4701192, Japan.
Michael Evan RothenbergInstitute for Stem Cell Biology and Regenerative Medicine, Stanford University, Stanford, CA, 94305, USA.
Masao MaedaDepartment of Biochemistry, Fujita Health University School of Medicine, Toyoake, Aichi, 4701192, Japan.
Taichi IsobeInstitute for Stem Cell Biology and Regenerative Medicine, Stanford University, Stanford, CA, 94305, USA.
Luis Enrique Valencia SalazarDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.ORCID 0000-0002-5499-1394
Xin QianInstitute for Stem Cell Biology and Regenerative Medicine, Stanford University, Stanford, CA, 94305, USA.
Darius Michael JohnstonInstitute for Stem Cell Biology and Regenerative Medicine, Stanford University, Stanford, CA, 94305, USA.
Dalong QianInstitute for Stem Cell Biology and Regenerative Medicine, Stanford University, Stanford, CA, 94305, USA.
Kaiqin LaoGenetic Sciences Division (GSD), Thermo Fisher Scientific, South San Francisco, CA, 94080, USA.
Naoya AsaiDepartment of Pathology, Fujita Health University School of Medicine, Toyoake, Aichi, 4701192, Japan.
Yoshihiro KakejiDivision of Gastrointestinal Surgery, Kobe University Graduate School of Medicine, Kobe, Hyogo, 6500017, Japan.
Vincenzo Alessandro GennarinoDepartment of Genetics and Development, Columbia University Irving Medical Center, New York, NY, 10032, USA.
Debashis SahooDepartment of Computer Science and Engineering and Department of Pediatrics, University of California San Diego (UCSD), San Diego, CA, 92123, USA.
Piero Dalerba *Department of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA. pdd2109@cumc.columbia.edu.
Yohei Shimono *Institute for Stem Cell Biology and Regenerative Medicine, Stanford University, Stanford, CA, 94305, USA. yshimono@fujita-hu.ac.jp.ORCID 0000-0002-6256-4704
California Institute for Regenerative Medicine · USFujita Health University · JPCenter for Digestive and Liver Diseases · USColumbia University Irving Medical Center · USKobe University · JPThermo Fisher Scientific (United States) · USUniversity of California San Diego · US

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
Deciphering the Role of the Pumilio1 in Two Distinct Neurological DiseasesR01NS109858 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Vincenzo Alessandro Gennarino · 2019 to 2026
$4.1M
Summer Student Research on the Application of Boolean AnalysisR01GM138385 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SAHOO, DEBASHIS · 2020 to 2023
$2.0M
Dissecting cell composition and drug sensitivity in human adenoid cystic carcinomas (ACCs).R01DE028961 · NIDCR · HACKENSACK UNIVERSITY MEDICAL CENTER · PI DALERBA, PIERO D · 2019 to 2023
$1.9M
Application of Boolean Networks to discover stem and progenitor cellsR00CA151673 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SAHOO, DEBASHIS · 2014 to 2016
$717k
A novel colonic crypt base secretory cell that supports colon stem cellsK08DK097181 · NIDDK · STANFORD UNIVERSITY · PI ROTHENBERG, MICHAEL EVAN · 2013 to 2014
$245k
Damon Runyon Cancer Research Foundation DRR-44-16Japan Society for the Promotion of Science 15K14381Japan Society for the Promotion of Science 17K16555Japan Society for the Promotion of Science 18K07231Japan Society for the Promotion of Science 19K09106Japan Society for the Promotion of Science 21H02769NCI NIH HHS P30 CA013696NCI NIH HHS R00 CA151673New York State Stem Cell Science DOH01-C30291GG-3450000NIDCR NIH HHS R01 DE028961NIDDK NIH HHS K08 DK097181NIGMS NIH HHS R01 GM138385NIGMS NIH HHS R01-GM138385NINDS NIH HHS R01 NS109858
6 · The paper itself

Abstract

backgroundMicroRNAs (miRNAs) are key regulators of stem cell functions, including self-renewal and differentiation. In this study, we aimed to identify miRNAs that are upregulated during terminal differentiation in the human colon epithelium, and elucidate their role in the mechanistic control of stem cell properties.

methods"Bottom-of-the-crypt" (EPCAM

resultsSix miRNAs (miR-200a, miR-200b, miR-200c, miR-203, miR-210, miR-345) were upregulated in "top-of-the-crypt" cells and positively correlated in expression among colon carcinomas. Overexpression of the three miRNAs with the highest inter-correlation coefficients (miR-200a, miR-200b, miR-200c) associated with improved survival. The top two over-expressed miRNAs (miR-200c, miR-203) cooperated synergistically in suppressing expression of BMI1, a key regulator of self-renewal in stem cell populations, and in inhibiting proliferation, organoid-formation and tumorigenicity of colon epithelial cells.

conclusionIn the colon epithelium, terminal differentiation associates with the coordinated upregulation of miR-200c and miR-203, which cooperate to suppress BMI1 and disable the expansion capacity of epithelial cells.

Indexed as

Colonic NeoplasmsMicroRNAsAnimalsCell Line, TumorEpithelial Cell Adhesion MoleculeEpithelial CellsGene Expression Regulation, NeoplasticHumansMicePolycomb Repressive Complex 1Proto-Oncogene ProteinsUp-RegulationBMI1 protein, humanBmi1 protein, mouseEpithelial Cell Adhesion MoleculeMicroRNAsMIRN203 microRNA, humanPolycomb Repressive Complex 1Proto-Oncogene ProteinsBMI1Cell differentiationColonmiRNATumor-suppressor

Identifiers

PMID35244768
PMCPMC10091510
OpenAlexW4214871785

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.