Evidence map›Paper›PMID 35244540›Full record

ArticleeLife2022

The TRRAP transcription cofactor represses interferon-stimulated genes in colorectal cancer cells.

Dylane Detilleux, Peggy Raynaud, Berengere Pradet-Balade, Dominique Helmlinger

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Review
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  12. Frontiers in epigenetics and epigenomics · 2024
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  13. The Clinical Significance of Genetic Variation in Ovarian Cancer.International journal of molecular sciences · 2023
    Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dylane DetilleuxCRBM, University of Montpellier, CNRS, Montpellier, France.
Peggy RaynaudCRBM, University of Montpellier, CNRS, Montpellier, France.ORCID 0000-0003-1224-8495
Berengere Pradet-BaladeCRBM, University of Montpellier, CNRS, Montpellier, France.ORCID 0000-0003-1720-3739
Dominique HelmlingerCRBM, University of Montpellier, CNRS, Montpellier, France.ORCID 0000-0003-1501-0423
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription is essential for cells to respond to signaling cues and involves factors with multiple distinct activities. One such factor, TRRAP, functions as part of two large complexes, SAGA and TIP60, which have crucial roles during transcription activation. Structurally, TRRAP belongs to the phosphoinositide 3 kinase-related kinases (PIKK) family but is the only member classified as a pseudokinase. Recent studies established that a dedicated HSP90 co-chaperone, the triple T (TTT) complex, is essential for PIKK stabilization and activity. Here, using endogenous auxin-inducible degron alleles, we show that the TTT subunit TELO2 promotes TRRAP assembly into SAGA and TIP60 in human colorectal cancer cells (CRCs). Transcriptomic analysis revealed that TELO2 contributes to TRRAP regulatory roles in CRC cells, most notably of MYC target genes. Surprisingly, TELO2 and TRRAP depletion also induced the expression of type I interferon genes. Using a combination of nascent RNA, antibody-targeted chromatin profiling (CUT&RUN), ChIP, and kinetic analyses, we propose a model by which TRRAP directly represses the transcription of

Indexed as

Colorectal NeoplasmsInterferonsHistone AcetyltransferasesHumansPhosphatidylinositol 3-KinasesTranscription FactorsHistone AcetyltransferasesInterferonsPhosphatidylinositol 3-KinasesTranscription Factorschaperonechromosomescolorectal cancergene expressionhumaninterferonPIKKtranscription

Identifiers

PMID35244540
PMCPMC8926402
OpenAlexW4220695785

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.