Evidence map›Paper›PMID 35242443›Full record

ArticleJournal of pathology informatics2022

Automatic Classification of Cancer Pathology Reports: A Systematic Review.

Thiago Santos, Amara Tariq, Judy Wawira Gichoya, Hari Trivedi, Imon Banerjee

Erratum issuedAbstract read
In one paragraph

Article in Journal of pathology informatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Thiago SantosDepartment of Computer Science, Emory University, Atlanta, GA, USA.
Amara TariqDepartment of Radiology, Mayo Clinic, Phoenix, AZ, USA.
Judy Wawira GichoyaDepartment of Biomedical Informatics, Emory School of Medicine, Atlanta, GA, USA.
Hari TrivediDepartment of Biomedical Informatics, Emory School of Medicine, Atlanta, GA, USA.
Imon BanerjeeDepartment of Radiology, Mayo Clinic, Phoenix, AZ, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathology reports primarily consist of unstructured free text and thus the clinical information contained in the reports is not trivial to access or query. Multiple natural language processing (NLP) techniques have been proposed to automate the coding of pathology reports via text classification. In this systematic review, we follow the guidelines proposed by the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA; Page et al., 2020:

Identifiers

PMID35242443
PMCPMC8860734

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.