Evidence map›Paper›PMID 35241647›Full record

ArticleCell death discovery2022

Kinase activity profiling identifies putative downstream targets of cGMP/PKG signaling in inherited retinal neurodegeneration.

Akanksha Roy, Arianna Tolone, Riet Hilhorst, John Groten, Tushar Tomar, François Paquet-Durand

Open access · goldAbstract read
In one paragraph

Article in Cell death discovery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Integrative Kinase Activity Profiling and Phosphoproteomics ofInternational journal of molecular sciences · 2024
    Article
  8. Article
  9. Article
  10. cGMP Signaling in Photoreceptor Degeneration.International journal of molecular sciences · 2023
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Frontiers in neuroscience · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Akanksha Roy *Division of Toxicology, Wageningen University and Research, 96708 WE, Wageningen, The Netherlands.
Arianna Tolone *Cell Death Mechanism Group, Institute for Ophthalmic Research, Eberhard-Karls-Universität, Tübingen, 72072, Germany.
Riet HilhorstPamGene International B.V, 5200 BJ, s-Hertogenbosch, The Netherlands.ORCID http://orcid.org/0000-0002-8261-1299
John GrotenDivision of Toxicology, Wageningen University and Research, 96708 WE, Wageningen, The Netherlands.
Tushar TomarPamGene International B.V, 5200 BJ, s-Hertogenbosch, The Netherlands. ttomar@pamgene.com.ORCID http://orcid.org/0000-0002-3344-7605
François Paquet-DurandCell Death Mechanism Group, Institute for Ophthalmic Research, Eberhard-Karls-Universität, Tübingen, 72072, Germany. francois.paquet-durand@uni-tuebingen.de.ORCID http://orcid.org/0000-0001-7355-5742
PamGene (Netherlands) · NLUniversity of Tübingen · DE

Funding

EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 765441
6 · The paper itself

Abstract

Inherited retinal diseases (IRDs) are a group of neurodegenerative disorders that lead to photoreceptor cell death and eventually blindness. IRDs are characterised by a high genetic heterogeneity, making it imperative to design mutation-independent therapies. Mutations in a number of IRD disease genes have been associated with a rise of cyclic 3',5'-guanosine monophosphate (cGMP) levels in photoreceptors. Accordingly, the cGMP-dependent protein kinase (PKG) has emerged as a new potential target for the mutation-independent treatment of IRDs. However, the substrates of PKG and the downstream degenerative pathways triggered by its activity have yet to be determined. Here, we performed kinome activity profiling of different murine organotypic retinal explant cultures (diseased rd1 and wild-type controls) using multiplex peptide microarrays to identify proteins whose phosphorylation was significantly altered by PKG activity. In addition, we tested the downstream effect of a known PKG inhibitor CN03 in these organotypic retina cultures. Among the PKG substrates were potassium channels belonging to the K

Identifiers

PMID35241647
PMCPMC8894370
OpenAlexW4220995186

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.