Evidence map›Paper›PMID 35239677›Full record

ArticlePloS one2022

Implementation of a COVID-19 Genomic Surveillance Regional Network for Latin America and Caribbean region.

Juliana Almeida Leite, Andrea Vicari, Enrique Perez, Marilda Siqueira, Paola Resende, Fernando Couto Motta, Lucas Freitas, Jorge Fernandez, Barbara Parra, Andrés Castillo and 8 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. SARS-CoV-2 Variants in Rhode Island; May 2022 Update.Rhode Island medical journal (2013) · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 4 countries.

Juliana Almeida LeiteHealth Emergencies Department, Pan American Health Organization, Washington, DC, United States of America.ORCID 0000-0002-8620-114X
Andrea VicariHealth Emergencies Department, Pan American Health Organization, Washington, DC, United States of America.
Enrique PerezHealth Emergencies Department, Pan American Health Organization, Washington, DC, United States of America.
Marilda SiqueiraLaboratorio de Virus Respiratorio, Fundação Oswaldo Cruz, Rio de Janeiro, RJ, Brazil.
Paola ResendeLaboratorio de Virus Respiratorio, Fundação Oswaldo Cruz, Rio de Janeiro, RJ, Brazil.
Fernando Couto MottaLaboratorio de Virus Respiratorio, Fundação Oswaldo Cruz, Rio de Janeiro, RJ, Brazil.
Lucas FreitasLaboratorio de Virus Respiratorio, Fundação Oswaldo Cruz, Rio de Janeiro, RJ, Brazil.ORCID 0000-0002-8766-0890
Jorge FernandezSubdepartamento Genética Molecular, Instituto de Salud Pública de Chile, Santiago, Chile.
Barbara ParraSubdepartamento Genética Molecular, Instituto de Salud Pública de Chile, Santiago, Chile.
Andrés CastilloSubdepartamento Genética Molecular, Instituto de Salud Pública de Chile, Santiago, Chile.
Rodrigo FasceSubdepartamento Enfermidades Virales, Instituto de Salud Pública de Chile, Santiago, Chile.
Alexander Augusto Martinez CaballeroDepartamento de Investigación en Genómica y Proteómica, Instituto Conmemorativo Gorgas de Estudio de la Salud, Cuidad de Panamá, Panamá.ORCID 0000-0002-7816-3040
COVID-19 Genomic Surveillance Regional Network
Lionel GreshHealth Emergencies Department, Pan American Health Organization, Washington, DC, United States of America.ORCID 0000-0002-2333-1748
Sylvain AldighieriHealth Emergencies Department, Pan American Health Organization, Washington, DC, United States of America.
Jean-Marc GabastouHealth Emergencies Department, Pan American Health Organization, Washington, DC, United States of America.
Leticia FrancoHealth Emergencies Department, Pan American Health Organization, Washington, DC, United States of America.
Jairo Mendez-RicoHealth Emergencies Department, Pan American Health Organization, Washington, DC, United States of America.
World Health Organization Regional Office for the Americas · USFundação Oswaldo Cruz · BRInstituto de Salud Pública de Chile · CLInstituto Conmemorativo Gorgas de Estudios de la Salud · PA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The timely release of SARS-CoV-2 first genomic sequences allowed the identification of the etiologic agent and development of diagnostic protocols. Genomic sequencing was a crucial step in generating data for driving laboratory response and detections of SARS-CoV-2 since the start of the COVID-19 pandemic. Because of all the progression and achievements that timely release of genetic sequence data represents in the public health response, the Pan American Health Organization (PAHO) in collaboration with countries' public health laboratories, started implementation of a network for strengthening the Latin America and Caribbean (LAC) region on timely generation of SARS-CoV-2 genomic data. Here we describe the implementation of the COVID-19 Genomic Surveillance Regional Network in the Americas region during the beginning of the pandemic. The establishment of this network has strengthened laboratory response capacity at the country level, as well as facilitated timely release of SARS-CoV-2 genomic information to be used to complement the multiple response strategies for COVID-19 pandemic mitigation. As genomic epidemiology is useful for guiding public health decisions on outbreak and response, we also analysed the first SARS-CoV-2 genomic sequence data from countries of the Latin America and Caribbean Region.

Indexed as

COVID-19SARS-CoV-2Caribbean RegionGenome, ViralGenomicsHumansLatin AmericaPandemicsPublic Health

Identifiers

PMID35239677
PMCPMC8893691
OpenAlexW4214922652

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.