Evidence map›Paper›PMID 35238938›Full record

ReviewFEMS yeast research2022

Modelling of glucose repression signalling in yeast Saccharomyces cerevisiae.

Sebastian Persson, Sviatlana Shashkova, Linnea Österberg, Marija Cvijovic

Open access · hybridAbstract readReview
In one paragraph

Review in FEMS yeast research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. New insights into carbon metabolism in SFrontiers in fungal biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sebastian PerssonDepartment of Mathematical Sciences, Chalmers University of Technology, Chalmers tvärgata 3, 412 96 Gothnburg, Sweden.
Sviatlana ShashkovaDepartment of Mathematical Sciences, Chalmers University of Technology, Chalmers tvärgata 3, 412 96 Gothnburg, Sweden.
Linnea ÖsterbergDepartment of Mathematical Sciences, Chalmers University of Technology, Chalmers tvärgata 3, 412 96 Gothnburg, Sweden.ORCID 0000-0002-9816-6476
Marija CvijovicDepartment of Mathematical Sciences, Chalmers University of Technology, Chalmers tvärgata 3, 412 96 Gothnburg, Sweden.ORCID 0000-0002-5142-5100
Chalmers University of Technology · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Saccharomyces cerevisiae has a sophisticated signalling system that plays a crucial role in cellular adaptation to changing environments. The SNF1 pathway regulates energy homeostasis upon glucose derepression; hence, it plays an important role in various processes, such as metabolism, cell cycle and autophagy. To unravel its behaviour, SNF1 signalling has been extensively studied. However, the pathway components are strongly interconnected and inconstant; therefore, elucidating its dynamic behaviour based on experimental data only is challenging. To tackle this complexity, systems biology approaches have been successfully employed. This review summarizes the progress, advantages and disadvantages of the available mathematical modelling frameworks covering Boolean, dynamic kinetic, single-cell models, which have been used to study processes and phenomena ranging from crosstalks to sources of cell-to-cell variability in the context of SNF1 signalling. Based on the lessons from existing models, we further discuss how to develop a consensus dynamic mechanistic model of the entire SNF1 pathway that can provide novel insights into the dynamics of nutrient signalling.

Indexed as

Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsGlucoseProtein Serine-Threonine KinasesSignal TransductionGlucoseProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsBooleandynamicglucose signallingsingle-cellsystems biology

Identifiers

PMID35238938
PMCPMC8916112
OpenAlexW4214708152

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.