Evidence map›Paper›PMID 35238540›Full record

ArticleAnalytical chemistry2022

Matrix-Assisted Laser Desorption and Ionization Time-of-Flight Mass Spectrometry Analysis for the Direct Detection of SARS-CoV-2 in Nasopharyngeal Swabs.

Tomoya Yoshinari, Katsuhiko Hayashi, Shouhei Hirose, Kenji Ohya, Takahiro Ohnishi, Maiko Watanabe, Satoshi Taharaguchi, Hirohisa Mekata, Takahide Taniguchi, Takuya Maeda and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Analytical chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Mass spectrometry in animal health laboratories: recent history, current applications, and future directions.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2024
    Review
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Tomoya YoshinariDivision of Microbiology, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.ORCID 0000-0001-9263-661X
Katsuhiko HayashiDivision of Microbiology, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.ORCID 0000-0001-7359-5939
Shouhei HiroseDivision of Microbiology, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.
Kenji OhyaDivision of Microbiology, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.
Takahiro OhnishiDivision of Microbiology, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.
Maiko WatanabeDivision of Microbiology, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.
Satoshi TaharaguchiLaboratory of Microbiology, Department of Veterinary Medicine, Azabu University, 1-17-71 Fucihnobe, Chuo-ku, Sagamihara, Kanagawa 252-5201, Japan.
Hirohisa MekataCenter for Animal Disease Control, University of Miyazaki, 1-1 Gakuen Kibanadai-nishi, Miyazaki 889-2192, Japan.
Takahide TaniguchiDivision of Animal Life Science, Institute of Agriculture, Tokyo University of Agriculture and Technology, 3-5-8 Saiwai-cho, Fuchu-shi, Tokyo 183-8509, Japan.
Takuya MaedaDepartment of Clinical Laboratory, Saitama Medical University Hospital, 38 Morohongo Moroyama-machi, Iruma-gun, Saitama 350-0495, Japan.
Yuta OriharaDepartment of Clinical Laboratory, Saitama Medical University Hospital, 38 Morohongo Moroyama-machi, Iruma-gun, Saitama 350-0495, Japan.
Rieko KawamuraDepartment of Clinical Laboratory, Saitama Medical University Hospital, 38 Morohongo Moroyama-machi, Iruma-gun, Saitama 350-0495, Japan.
Sakura AraiDivision of Microbiology, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.
Yoshiro SaitoDivision of Medicinal Safety Science, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.
Yukihiro GodaDirector General, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.
Yukiko Hara-KudoDivision of Microbiology, National Institute of Health Sciences, 3-25-26 Tonomachi, Kawasaki-ku, Kawasaki City, Kanagawa 210-9501, Japan.ORCID 0000-0003-3536-8107
National Institute of Health Sciences · JPSaitama Medical University Hospital · JPAzabu University · JPLife Science Institute · JPUniversity of Miyazaki · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The most common diagnostic method used for coronavirus disease-2019 (COVID-19) is real-time reverse transcription polymerase chain reaction (PCR). However, it requires complex and labor-intensive procedures and involves excessive positive results derived from viral debris. We developed a method for the direct detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in nasopharyngeal swabs, which uses matrix-assisted laser desorption and ionization time-of-flight mass spectrometry (MALDI-ToF MS) to identify specific peptides from the SARS-CoV-2 nucleocapsid phosphoprotein (NP). SARS-CoV-2 viral particles were separated from biological molecules in nasopharyngeal swabs by an ultrafiltration cartridge. Further purification was performed by an anion exchange resin, and purified NP was digested into peptides using trypsin. The peptides from SARS-CoV-2 that were inoculated into nasopharyngeal swabs were detected by MALDI-ToF MS, and the limit of detection was 10

Indexed as

COVID-19SARS-CoV-2HumansLasersNasopharynxRNA, ViralSpecimen HandlingSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationRNA, Viral

Identifiers

PMID35238540
PMCPMC8903212
OpenAlexW4214830881

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.