Evidence map›Paper›PMID 35238389›Full record

ArticlePlant physiology2022

SUMO E3 ligase SIZ1 connects sumoylation and reactive oxygen species homeostasis processes in Arabidopsis.

Pedro Humberto Castro, Daniel Couto, Miguel Ângelo Santos, Sara Freitas, Tiago Lourenço, Eva Dias, Stéphanie Huguet, Jorge Marques da Silva, Rui Manuel Tavares, Eduardo Rodríguez Bejarano and 1 more

Abstract read
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Pedro Humberto CastroCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão 4485-661, Portugal.ORCID 0000-0002-8729-3912
Daniel CoutoBiosystems & Integrative Sciences Institute (BioISI), Plant Functional Biology Center, University of Minho, Braga 4710-057, Portugal.ORCID 0000-0003-0223-1497
Miguel Ângelo SantosBiosystems & Integrative Sciences Institute (BioISI), Plant Functional Biology Center, University of Minho, Braga 4710-057, Portugal.
Sara FreitasCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão 4485-661, Portugal.
Tiago LourençoCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão 4485-661, Portugal.ORCID 0000-0002-4050-0195
Eva DiasBiosystems & Integrative Sciences Institute (BioISI), Plant Functional Biology Center, University of Minho, Braga 4710-057, Portugal.
Stéphanie HuguetUniversité Paris-Saclay, CNRS, INRAE, Univ Evry, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay 91405, France.
Jorge Marques da SilvaBiosystems and Integrative Sciences Institute (BioISI) and Departamento de Biologia Vegetal, Faculdade de Ciências, Universidade de Lisboa, Lisboa 1749-016, Portugal.ORCID 0000-0002-5583-2715
Rui Manuel TavaresBiosystems & Integrative Sciences Institute (BioISI), Plant Functional Biology Center, University of Minho, Braga 4710-057, Portugal.ORCID 0000-0002-1702-256X
Eduardo Rodríguez BejaranoInstituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Department of Biología Celular, Genética y Fisiología, Universidad de Málaga, Málaga 29071, Spain.ORCID 0000-0002-4806-253X
Herlander AzevedoCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão 4485-661, Portugal.ORCID 0000-0002-9324-3030

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ubiquitin-like modifying peptide SMALL UBIQUITIN-LIKE MODIFIER (SUMO) has become a known modulator of the plant response to multiple environmental stimuli. A common feature of many of these external stresses is the production of reactive oxygen species (ROS). Taking into account that SUMO conjugates rapidly accumulate in response to an external oxidative stimulus, it is likely that ROS and sumoylation converge at the molecular and regulatory levels. In this study, we explored the SUMO-ROS relationship, using as a model the Arabidopsis (Arabidopsis thaliana) null mutant of the major SUMO-conjugation enhancer, the E3 ligase SAP AND MIZ 1 (SIZ1). We showed that SIZ1 is involved in SUMO conjugate increase when primed with both exogenous and endogenous ROS. In siz1, seedlings were sensitive to oxidative stress imposition, and mutants accumulated different ROS throughout development. We demonstrated that the deregulation in hydrogen peroxide and superoxide homeostasis, but not of singlet O2 (1O2), was partially due to SA accumulation in siz1. Furthermore, transcriptomic analysis highlighted a transcriptional signature that implicated siz1 with 1O2 homeostasis. Subsequently, we observed that siz1 displayed chloroplast morphological defects and altered energy dissipation activity and established a link between the chlorophyll precursor protochlorophyllide and deregulation of PROTOCHLOROPHYLLIDE OXIDOREDUCTASE A (PORA), which is known to drive overproduction of 1O2. Ultimately, network analysis uncovered known and additional associations between transcriptional control of PORA and SIZ1-dependent sumoylation. Our study connects sumoylation, and specifically SIZ1, to the control of chloroplast functions and places sumoylation as a molecular mechanism involved in ROS homeostatic and signaling events.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantHomeostasisLigasesProtochlorophyllideReactive Oxygen SpeciesSumoylationUbiquitinUbiquitin-Protein LigasesArabidopsis ProteinsLigasesProtochlorophyllideReactive Oxygen SpeciesSIZ1 protein, ArabidopsisUbiquitinUbiquitin-Protein Ligases

Identifiers

PMID35238389
PMCPMC9157161

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.