Evidence map›Paper›PMID 35236843›Full record

ArticleScientific data2022

Data on the diets of Salish Sea harbour seals from DNA metabarcoding.

Austen C Thomas, Bruce Deagle, Chad Nordstrom, Sheena Majewski, Benjamin W Nelson, Alejandro Acevedo-Gutiérrez, Steven Jeffries, Jed Moore, Amelia Louden, Hassen Allegue and 3 more

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Austen C ThomasMolecular Division, Smith-Root Inc., 16603 NE 50th Avenue, Vancouver, WA, 98686, USA. athomas@smith-root.com.ORCID 0000-0002-6182-9440
Bruce DeagleAustralian National Fish Collection, CSIRO National Research Collections Australia, Hobart, TAS, Australia.
Chad NordstromPacific Biological Station, 3190 Hammond Bay Road, Fisheries and Oceans Canada, Nanaimo, BC, V9T 6N7, Canada.
Sheena MajewskiPacific Biological Station, 3190 Hammond Bay Road, Fisheries and Oceans Canada, Nanaimo, BC, V9T 6N7, Canada.
Benjamin W NelsonUniversity of British Columbia, Institute for the Oceans and Fisheries, 247-2202 Main Mall, Vancouver, BC V6T 1Z4, British Columbia, Canada.
Alejandro Acevedo-GutiérrezDepartment of Biology, Western Washington University, Bellingham, WA, 98225, USA.
Steven JeffriesWashington Department of Fish and Wildlife, Olympia, WA, 98501, USA.
Jed MooreNisqually Indian Tribe, Olympia, WA, 98513, USA.
Amelia LoudenWashington Department of Fish and Wildlife, Olympia, WA, 98501, USA.
Hassen AllegueUniversity of British Columbia, Institute for the Oceans and Fisheries, 247-2202 Main Mall, Vancouver, BC V6T 1Z4, British Columbia, Canada.ORCID 0000-0001-9357-9151
Scott PearsonWashington Department of Fish and Wildlife, Olympia, WA, 98501, USA.
Michael SchmidtLong Live the Kings, 1326 5th Avenue, 450, Seattle, Washington, 98101, USA.
Andrew W TritesUniversity of British Columbia, Institute for the Oceans and Fisheries, 247-2202 Main Mall, Vancouver, BC V6T 1Z4, British Columbia, Canada.
Fisheries and Oceans Canada · CAWashington Department of Fish and Wildlife · USAntioch University Seattle · USCommonwealth Scientific and Industrial Research Organisation · AUWashington Department of Natural Resources · USWestern Washington University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine trophic ecology data are in high demand as natural resource agencies increasingly adopt ecosystem-based management strategies that account for complex species interactions. Harbour seal (Phoca vitulina) diet data are of particular interest because the species is an abundant predator in the northeast Pacific Ocean and Salish Sea ecosystem that consumes Pacific salmon (Oncorhynchus spp.). A multi-agency effort was therefore undertaken to produce harbour seal diet data on an ecosystem scale using, 1) a standardized set of scat collection and analysis methods, and 2) a newly developed DNA metabarcoding diet analysis technique designed to identify prey species and quantify their relative proportions in seal diets. The DNA-based dataset described herein contains records from 4,625 harbour seal scats representing 52 haulout sites, 7 years, 12 calendar months, and a total of 11,641 prey identifications. Prey morphological hard parts analyses were conducted alongside, resulting in corresponding hard parts data for 92% of the scat DNA samples. A custom-built prey DNA sequence database containing 201 species (192 fishes, 9 cephalopods) is also provided.

Indexed as

DietDNAPhocaAnimalsDNA Barcoding, TaxonomicEcosystemDNA

Identifiers

PMID35236843
PMCPMC8891336
OpenAlexW4214842975

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.