Evidence map›Paper›PMID 35234933›Full record

ArticleNucleic acids research2022

G-quadruplexes in helminth parasites.

Alessio Cantara, Yu Luo, Michaela Dobrovolná, Natalia Bohalova, Miroslav Fojta, Daniela Verga, Lionel Guittat, Anne Cucchiarini, Solène Savrimoutou, Cécile Häberli and 4 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. G-Quadruplexes as Key Transcriptional Regulators in Neglected Trypanosomatid Parasites.Chembiochem : a European journal of chemical biology · 2023
    Review
  12. Review
  13. Article
  14. The Newly Sequenced Genome ofInternational journal of molecular sciences · 2022
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Alessio CantaraInstitute of Biophysics, Czech Academy of Sciences, Královopolská 135, 612 65 Brno, Czech Republic.
Yu LuoCNRS UMR9187, INSERM U1196, Université Paris-Saclay, F-91405 Orsay, France.
Michaela DobrovolnáFaculty of Chemistry, Brno University of Technology, Purkyňova 118, 612 00 Brno, Czech Republic.
Natalia BohalovaInstitute of Biophysics, Czech Academy of Sciences, Královopolská 135, 612 65 Brno, Czech Republic.
Miroslav FojtaInstitute of Biophysics, Czech Academy of Sciences, Královopolská 135, 612 65 Brno, Czech Republic.
Daniela VergaCNRS UMR9187, INSERM U1196, Université Paris-Saclay, F-91405 Orsay, France.ORCID 0000-0002-7555-6033
Lionel GuittatLaboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS, INSERM, Institut Polytechnique de Paris, 91128 Palaiseau, France.
Anne CucchiariniLaboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS, INSERM, Institut Polytechnique de Paris, 91128 Palaiseau, France.
Solène SavrimoutouARNA Laboratory, Université de Bordeaux, INSERM U1212, CNRS UMR 5320, UFR des Sciences Pharmaceutiques, Bordeaux, France.
Cécile HäberliDepartment of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.
Jean GuillonARNA Laboratory, Université de Bordeaux, INSERM U1212, CNRS UMR 5320, UFR des Sciences Pharmaceutiques, Bordeaux, France.
Jennifer KeiserDepartment of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.
Václav BrázdaInstitute of Biophysics, Czech Academy of Sciences, Královopolská 135, 612 65 Brno, Czech Republic.
Jean Louis MergnyInstitute of Biophysics, Czech Academy of Sciences, Královopolská 135, 612 65 Brno, Czech Republic.ORCID 0000-0003-3043-8401

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parasitic helminths infecting humans are highly prevalent infecting ∼2 billion people worldwide, causing inflammatory responses, malnutrition and anemia that are the primary cause of morbidity. In addition, helminth infections of cattle have a significant economic impact on livestock production, milk yield and fertility. The etiological agents of helminth infections are mainly Nematodes (roundworms) and Platyhelminths (flatworms). G-quadruplexes (G4) are unusual nucleic acid structures formed by G-rich sequences that can be recognized by specific G4 ligands. Here we used the G4Hunter Web Tool to identify and compare potential G4 sequences (PQS) in the nuclear and mitochondrial genomes of various helminths to identify G4 ligand targets. PQS are nonrandomly distributed in these genomes and often located in the proximity of genes. Unexpectedly, a Nematode, Ascaris lumbricoides, was found to be highly enriched in stable PQS. This species can tolerate high-stability G4 structures, which are not counter selected at all, in stark contrast to most other species. We experimentally confirmed G4 formation for sequences found in four different parasitic helminths. Small molecules able to selectively recognize G4 were found to bind to Schistosoma mansoni G4 motifs. Two of these ligands demonstrated potent activity both against larval and adult stages of this parasite.

Indexed as

G-QuadruplexesNematodaPlatyhelminthsAnimalsCattleGenomeHelminthsHumansLigandsParasitesLigands

Identifiers

PMID35234933
PMCPMC8934627

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.