Evidence map›Paper›PMID 35234875›Full record

ArticleGenetics2022

Novel genetic basis of resistance to Bt toxin Cry1Ac in Helicoverpa zea.

Kyle M Benowitz, Carson W Allan, Benjamin A Degain, Xianchun Li, Jeffrey A Fabrick, Bruce E Tabashnik, Yves Carrière, Luciano M Matzkin

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 34 citations in OpenAlex.

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  8. Mismatch between lab-generated and field-evolved resistance to transgenic Bt crops inProceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Kyle M BenowitzDepartment of Entomology, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0002-7685-1827
Carson W AllanDepartment of Entomology, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0002-2733-6482
Benjamin A DegainDepartment of Entomology, University of Arizona, Tucson, AZ 85721, USA.
Xianchun LiDepartment of Entomology, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0001-8332-7356
Jeffrey A FabrickU.S. Department of Agriculture, Agricultural Research Service, U.S. Arid Land Agricultural Research Center, Maricopa, AZ 85138, USA.ORCID 0000-0002-3893-9545
Bruce E TabashnikDepartment of Entomology, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0002-2430-2367
Yves CarrièreDepartment of Entomology, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0001-7730-9629
Luciano M MatzkinDepartment of Entomology, University of Arizona, Tucson, AZ 85721, USA.ORCID 0000-0002-3580-9171
University of Arizona · USAgricultural Research Service · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Crops genetically engineered to produce insecticidal proteins from the bacterium Bacillus thuringiensis have advanced pest management, but their benefits are diminished when pests evolve resistance. Elucidating the genetic basis of pest resistance to Bacillus thuringiensis toxins can improve resistance monitoring, resistance management, and the design of new insecticides. Here, we investigated the genetic basis of resistance to Bacillus thuringiensis toxin Cry1Ac in the lepidopteran Helicoverpa zea, one of the most damaging crop pests in the United States. To facilitate this research, we built the first chromosome-level genome assembly for this species, which has 31 chromosomes containing 375 Mb and 15,482 predicted proteins. Using a genome-wide association study, fine-scale mapping, and RNA-seq, we identified a 250-kb quantitative trait locus on chromosome 13 that was strongly associated with resistance in a strain of Helicoverpa zea that had been selected for resistance in the field and lab. The mutation in this quantitative trait locus contributed to but was not sufficient for resistance, which implies alleles in more than one gene contributed to resistance. This quantitative trait locus contains no genes with a previously reported role in resistance or susceptibility to Bacillus thuringiensis toxins. However, in resistant insects, this quantitative trait locus has a premature stop codon in a kinesin gene, which is a primary candidate as a mutation contributing to resistance. We found no changes in gene sequence or expression consistently associated with resistance for 11 genes previously implicated in lepidopteran resistance to Cry1Ac. Thus, the results reveal a novel and polygenic basis of resistance.

Indexed as

Bacillus thuringiensisInsecticidesMothsAnimalsBacillus thuringiensis ToxinsBacterial ProteinsEndotoxinsGenome-Wide Association StudyHemolysin ProteinsInsecticide ResistanceLarvaPlants, Genetically ModifiedZea maysBacillus thuringiensis ToxinsBacterial ProteinsEndotoxinsHemolysin ProteinsInsecticidesBacillus thuringiensisgenome assemblygenome-wide association studyinsecticide resistancekinesinLepidopteratransgenic crops

Identifiers

PMID35234875
PMCPMC9071530
OpenAlexW4214913712

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.