Evidence map›Paper›PMID 35234492›Full record

ArticleMicrobiology resource announcements2022

Complete Genome Sequence of Clostridium cadaveris IFB3C5, Isolated from a Human Colonic Adenocarcinoma.

Adam S McGlinchey, Martha A Zepeda-Rivera, Marija Stepanovica, Alexander A Baryiames, Dakota S Jones, Kaitlyn D LaCourse, Susan Bullman, Christopher D Johnston

Open access · diamondAbstract read
In one paragraph

Article in Microbiology resource announcements, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Adam S McGlincheyVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Martha A Zepeda-RiveraVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID 0000-0002-2408-8719
Marija StepanovicaVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Alexander A BaryiamesHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Dakota S JonesVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Kaitlyn D LaCourseHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID 0000-0002-6194-4553
Susan BullmanHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID 0000-0002-7713-0810
Christopher D JohnstonVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID 0000-0002-6765-2383
Fred Hutch Cancer Center · US

Funding

The SyngenicDNA and μPOET Platform: Overcoming Innate Barriers to Genetic Engineering in Bacteria.R01DE027850 · NIDCR · FRED HUTCHINSON CANCER RESEARCH CENTER · PI JOHNSTON, CHRISTOPHER D · 2017 to 2021
$4.9M
The role of Fusobacterium in colorectal cancer treatment, tumor ecology and chemotherapeutic efficacyR00CA229984 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BULLMAN, SUSAN · 2019 to 2021
$718k
HHS | NIH | National Cancer Institute (NCI) R00 CA229984-03NCI NIH HHS R00 CA229984NIDCR NIH HHS R01 DE027850Washington Research Foundation Postdoctoral Fellowship
6 · The paper itself

Abstract

We report the complete genome sequence of Clostridium cadaveris IFB3C5, a strain isolated from the resected tumor of a treatment naive colorectal cancer patient. This genome is comprised of a singular chromosome of approximately 3.63 Mbp in length, contains two plasmids, and has an overall mean GC content of 31.7%.

Identifiers

PMID35234492
PMCPMC8928765
OpenAlexW4214806610

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.