Evidence map›Paper›PMID 35233565›Full record

ArticleResearch square2022

Characterization and antiviral susceptibility of SARS-CoV-2 Omicron/BA.2.

Yoshihiro Kawaoka, Ryuta Uraki, Maki Kiso, Shun Iida, Masaki Imai, Emi Takashita, Makoto Kuroda, Peter Halfmann, Samantha Loeber, Tadashi Maemura and 40 more

Open access · greenAbstract readPreprint
In one paragraph

Article in Research square, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 41 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

50 authors at 12 institutions in 3 countries.

Yoshihiro KawaokaUniversity of Wisconsin-Madison.ORCID 0000-0001-5061-8296
Ryuta UrakiNational Center for Global Health and Medicine Research Institute.ORCID 0000-0003-0890-1922
Maki KisoInstitute of Medical Sciences, University of Tokyo.
Shun IidaNational Institute of Infectious Diseases.ORCID 0000-0003-2258-9031
Masaki ImaiUniversity of Tokyo.ORCID 0000-0001-6988-1975
Emi TakashitaNational Institute of Infectious Diseases.ORCID 0000-0002-9064-4699
Makoto KurodaUniversity of Wisconsin at Madison.
Peter HalfmannInfluenza Research Institute, Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin, Madison, WI, USA.
Samantha LoeberUniversity of Wisconsin-Madison.
Tadashi MaemuraUniversity of Wisconsin.
Seiya YamayoshiUniversity Of Tokyo.ORCID 0000-0001-7768-5157
Seiichiro FujisakiNational Institute of Infectious Diseases.
Zhongde WangUtah State University.ORCID 0000-0003-2441-4729
Mutsumi ItoUniversity of Tokyo, Institute of Medical Science.
Michiko UjieDivision of Virology, Institute of Medical Science, University of Tokyo.
Kiyoko Iwatsuki-HorimotoUniversity of Tokyo.ORCID 0000-0002-8266-020X
Yuri FurusawaDivision of Virology, Institute of Medical Science, University of Tokyo.
Ryan WrightInfluenza Research Institute, Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison.
Zhenlu ChongWashington University.
Seiya OzonoNational Institute of Infectious Diseases.ORCID 0000-0002-1764-2937
Atsuhiro YasuharaDivision of Virology, Institute of Medical Science, University of Tokyo.
Hiroshi UekiThe University of Tokyo.ORCID 0000-0002-6557-0771
Yuko SakaiInstitute of Medical Sciences, University of Tokyo.
Rong LiDepartment of Animal Dairy, and Veterinary Sciences, College of Agriculture and Applied Sciences, Utah State University.
Yanan LiuDepartment of Animal Dairy, and Veterinary Sciences, College of Agriculture and Applied Sciences, Utah State University.
Deanna LarsonUtah State University, College of Agriculture and Applied Sciences.
Michiko KogaThe Institute of Medical Science, the University of Tokyo.
Takeya TsutsumiDivision of Infectious Diseases, Advanced Clinical Research Center, Institute of Medical Science, University of Tokyo.
Eisuke AdachiThe Institute of Medical Science, the University of Tokyo.ORCID 0000-0002-1623-873X
Makoto SaitoDivision of Infectious Diseases, Advanced Clinical Research Center, Institute of Medical Science, University of Tokyo.
Shinya YamamotoDivision of Infectious Diseases, Advanced Clinical Research Center, Institute of Medical Science, University of Tokyo.
Shohei MatsubaraDivision of Infectious Diseases, Advanced Clinical Research Center, Institute of Medical Science, University of Tokyo.
Masao HagiharaDivision of Infection Control, Eiju General Hospital.
Keiko MitamuraDivision of Infection Control, Eiju General Hospital.
Tetsuro SatoDisease Control and Prevention Center, National Center for Global Health and Medicine Hospital.
Masayuki HojoDepartment of Respiratory Medicine, National Center for Global Health and Medicine Hospital.
Shin-Ichiro HattoriNational Center for Global Health and Medicine Research Institute.ORCID 0000-0002-5637-3397
Kenji MaedaNational Center For Global Health and Medicine.ORCID 0000-0002-9424-1491
Moe OkudaDepartment of Virology, Institute of Medical Science, University of Tokyo.
Jurika MurakamiDepartment of Virology, Institute of Medical Science, University of Tokyo.
Calvin DuongDepartment of Virology, Institute of Medical Science, University of Tokyo.
Sucheta GodboleHuman Immunology Section, Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health.
Daniel DouekNIH.
Shinji WatanabeNational Institute of Infectious Diseases.
Norio OhmagariDisease Control and Prevention Center, National Center for Global Health and Medicine.
Hiroshi YotsuyanagiUniversity of Tokyo.
Michael DiamondWashington University in Saint Louis.ORCID 0000-0002-8791-3165
Hideki HasegawaNational Institute of Infectious Diseases.
Hiroaki MitsuyaNational Center for Global Health and Medicine Research Institute.ORCID 0000-0001-9274-3853
Tadaki SuzukiNational Institute of Infectious Diseases.ORCID 0000-0002-3820-9542
National Institute of Infectious Diseases · JPThe University of Tokyo · JPNational Center for Global Health and Medicine · JPTokyo University of Science · JPUniversity of Wisconsin–Madison · USAdvanced Medical Research Institute · USUtah State University · USEiju General Hospital · JPInstitute of Medical Sciences · INCenter for Global Health · USNational Institutes of Health · USWashington University in St. Louis · US

Funding

NIAID Centers of Excellence for Influenza Research and Response: Universal Influenza Vaccine Research Activities75N93021C00014 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GARCIA-SASTRE, ADOLFO · 2021 to 2025
$62.6M
Human antibody-based countermeasures against the Wuhan Coronavirus SARS-CoV-2R01AI157155 · NIAID · WASHINGTON UNIVERSITY · PI BARIC, RALPH S, CROWE, JAMES E · 2020 to 2024
$6.0M
NIAID NIH HHS 75N93021C00014NIAID NIH HHS HHSN272201400008CNIAID NIH HHS R01 AI157155
6 · The paper itself

Abstract

The recent emergence of SARS-CoV-2 Omicron variants possessing large numbers of mutations has raised concerns of decreased effectiveness of current vaccines, therapeutic monoclonal antibodies, and antiviral drugs for COVID-19 against these variants1,2. While the original Omicron lineage, BA.1, has become dominant in many countries, BA.2 has been detected in at least 67 countries and has become dominant in the Philippines, India, and Denmark. Here, we evaluated the replicative ability and pathogenicity of an authentic infectious BA.2 isolate in immunocompetent and human ACE2 (hACE2)-expressing mice and hamsters. In contrast to recent data with chimeric, recombinant SARS-CoV-2 strains expressing the spike proteins of BA.1 and BA.2 on an ancestral WK-521 backbone3, we observed similar infectivity and pathogenicity in mice and hamsters between BA.2 and BA.1, and less pathogenicity compared to early SARS-CoV-2 strains. We also observed a marked and significant reduction in the neutralizing activity of plasma from COVID-19 convalescent individuals and vaccine recipients against BA.2 compared to ancestral and Delta variant strains. In addition, we found that some therapeutic monoclonal antibodies (REGN10987/REGN10933, COV2-2196/COV2-2130, and S309) and antiviral drugs (molnupiravir, nirmatrelvir, and S-217622) can restrict viral infection in the respiratory organs of hamsters infected with BA.2. These findings suggest that the replication and pathogenicity of BA.2 is comparable to that of BA.1 in rodents and that several therapeutic monoclonal antibodies and antiviral compounds are effective against Omicron/BA.2 variants.

Identifiers

PMID35233565
PMCPMC8887076
OpenAlexW4214604913

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.