Evidence map›Paper›PMID 35233374›Full record

ArticleJournal of clinical and translational hepatology2022

Associating Preoperative MRI Features and Gene Expression Signatures of Early-stage Hepatocellular Carcinoma Patients using Machine Learning.

Xiaoming Li, Lin Cheng, Chuanming Li, Xianling Hu, Xiaofei Hu, Liang Tan, Qing Li, Chen Liu, Jian Wang

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Article in Journal of clinical and translational hepatology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xiaoming LiDepartment of Radiology, Southwest Hospital, Third Military Medical University (Army Military Medical University), Chongqing, China.
Lin ChengDepartment of Radiology, Southwest Hospital, Third Military Medical University (Army Military Medical University), Chongqing, China.
Chuanming LiDepartment of Radiology, Southwest Hospital, Third Military Medical University (Army Military Medical University), Chongqing, China.
Xianling HuDepartment of Radiology, Southwest Hospital, Third Military Medical University (Army Military Medical University), Chongqing, China.
Xiaofei HuDepartment of Radiology, Southwest Hospital, Third Military Medical University (Army Military Medical University), Chongqing, China.
Liang TanDepartment of Neurosurgery, Southwest Hospital, Third Military Medical University (Army Military Medical University), Chongqing, China.
Qing LiMR Collaborations, Siemens Healthcare Ltd., Shanghai, China.
Chen LiuDepartment of Radiology, Southwest Hospital, Third Military Medical University (Army Military Medical University), Chongqing, China.ORCID https://orcid.org/0000-0001-5149-2496
Jian WangDepartment of Radiology, Southwest Hospital, Third Military Medical University (Army Military Medical University), Chongqing, China.ORCID https://orcid.org/0000-0003-1210-0837

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsThe relationship between quantitative magnetic resonance imaging (MRI) imaging features and gene-expression signatures associated with the recurrence of hepatocellular carcinoma (HCC) is not well studied.

methodsIn this study, we generated multivariable regression models to explore the correlation between the preoperative MRI features and Golgi membrane protein 1 (GOLM1), SET domain containing 7 (SETD7), and Rho family GTPase 1 (RND1) gene expression levels in a cohort study including 92 early-stage HCC patients. A total of 307 imaging features of tumor texture and shape were computed from T2-weighted MRI. The key MRI features were identified by performing a multi-step feature selection procedure including the correlation analysis and the application of RELIEFF algorithm. Afterward, regression models were generated using kernel-based support vector machines with 5-fold cross-validation.

resultsThe features computed from higher specificity MRI better described GOLM1 and RND1 gene-expression levels, while imaging features computed from lower specificity MRI data were more descriptive for the SETD7 gene. The GOLM1 regression model generated with three features demonstrated a moderate positive correlation (

conclusionsThe results demonstrated that MRI radiomics features could help quantify GOLM1, SETD7, and RND1 expression levels noninvasively and predict the recurrence risk for early-stage HCC patients.

Indexed as

Gene-expressionHepatocellular carcinomaMRIRadiomics feature

Identifiers

PMID35233374
PMCPMC8845145

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