Evidence map›Paper›PMID 35231807›Full record

ArticleDiagnostic microbiology and infectious disease2022

Emergence and onward transmission of a SARS-CoV-2 E484K variant among household contacts of a bamlanivimab-treated patient.

Arick P Sabin, Craig S Richmond, Paraic A Kenny

Open access · greenAbstract read
In one paragraph

Article in Diagnostic microbiology and infectious disease, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 2 pooled it
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 2 syntheses or guidelines pooled it, 11 citations in OpenAlex.

  1. Guideline
  2. Pooled it
  3. Review
  4. Article
  5. De novo emergence of SARS-CoV-2 spike mutations in immunosuppressed patients.Transplant infectious disease : an official journal of the Transplantation Society · 2022
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Arick P SabinDepartment of Infectious Disease, Gundersen Health System, La Crosse, WI, USA. Electronic address: apsabin@gundersenhealth.org.
Craig S RichmondKabara Cancer Research Institute, Gundersen Medical Foundation, La Crosse, WI, USA.
Paraic A KennyKabara Cancer Research Institute, Gundersen Medical Foundation, La Crosse, WI, USA; Department of Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA. Electronic address: pakenny@gundersenhealth.org.
Gundersen Health System · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The implementation of monoclonal antibody therapeutics during the COVID-19 pandemic altered the selective pressures encountered by SARS-CoV-2, raising the possibility of selection for resistant variants. Within-host viral evolution was reported in treated immunocompromised individuals but whether this signifies a real risk of onward transmission is unclear. We used a regional SARS-CoV-2 sequencing program to monitor lineages with clinically relevant variants in identified patients, which facilitated analysis of parameters potentially relevant to new variant emergence. Here we describe a newly acquired spike E484K mutation detected within the B.1.311 lineage. Multiple individuals in 2 households of the same extended family were infected. The timing and patterns of spread were consistent with de novo emergence of this E484K variant in the bamlanivimab-treated index patient. Our study suggests that the selective pressures introduced by the widespread administration of these antibodies may warrant increased genomic surveillance to identify and mitigate spread of therapy-induced variants.

Indexed as

COVID-19SARS-CoV-2Antibodies, Monoclonal, HumanizedAntibodies, NeutralizingHumansMutationPandemicsSpike Glycoprotein, CoronavirusAntibodies, Monoclonal, HumanizedAntibodies, NeutralizingbamlanivimabSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Antibody escape mutationDrug resistanceSARS-CoV-2Variant of concern

Identifiers

PMID35231807
PMCPMC8810429
OpenAlexW4210394633

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.