Evidence map›Paper›PMID 35229433›Full record

ArticleEnvironmental microbiology2022

Stem traits, compartments and tree species affect fungal communities on decaying wood.

Shanshan Yang, Lourens Poorter, Eiko E Kuramae, Ute Sass-Klaassen, Marcio F A Leite, Ohana Y A Costa, George A Kowalchuk, Johannes H C Cornelissen, Jurgen van Hal, Leo Goudzwaard and 3 more

Abstract read
In one paragraph

Article in Environmental microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Annual Dynamics of Mycobiota in Symptomatic Century-Old Trees ofJournal of fungi (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Shanshan YangForest Ecology and Forest Management Group, Wageningen University and Research, P.O. Box 47, Wageningen, 6700 AA, The Netherlands.ORCID 0000-0002-0710-1985
Lourens PoorterForest Ecology and Forest Management Group, Wageningen University and Research, P.O. Box 47, Wageningen, 6700 AA, The Netherlands.ORCID 0000-0003-1391-4875
Eiko E KuramaeDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, 6708 PB, The Netherlands.ORCID 0000-0001-6701-8668
Ute Sass-KlaassenForest Ecology and Forest Management Group, Wageningen University and Research, P.O. Box 47, Wageningen, 6700 AA, The Netherlands.ORCID 0000-0002-8479-3209
Marcio F A LeiteDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, 6708 PB, The Netherlands.ORCID 0000-0002-4943-2213
Ohana Y A CostaDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, 6708 PB, The Netherlands.ORCID 0000-0003-3227-3727
George A KowalchukEcology and Biodiversity Group, Department of Biology, Institute of Environmental Biology, Utrecht University, Padualaan 8, Utrecht, 3584 CH, The Netherlands.ORCID 0000-0003-3866-0832
Johannes H C CornelissenSystems Ecology, Department of Ecological Science, VU University (Vrije Universiteit) Amsterdam, De Boelelaan 1085, Amsterdam, 1081 HV, The Netherlands.ORCID 0000-0002-2346-1585
Jurgen van HalSystems Ecology, Department of Ecological Science, VU University (Vrije Universiteit) Amsterdam, De Boelelaan 1085, Amsterdam, 1081 HV, The Netherlands.ORCID 0000-0002-9466-8997
Leo GoudzwaardForest Ecology and Forest Management Group, Wageningen University and Research, P.O. Box 47, Wageningen, 6700 AA, The Netherlands.
Mariet M HeftingEcology and Biodiversity Group, Department of Biology, Institute of Environmental Biology, Utrecht University, Padualaan 8, Utrecht, 3584 CH, The Netherlands.ORCID 0000-0002-3852-7532
Richard S P van LogtestijnSystems Ecology, Department of Ecological Science, VU University (Vrije Universiteit) Amsterdam, De Boelelaan 1085, Amsterdam, 1081 HV, The Netherlands.ORCID 0000-0001-9063-2180
Frank J SterckForest Ecology and Forest Management Group, Wageningen University and Research, P.O. Box 47, Wageningen, 6700 AA, The Netherlands.ORCID 0000-0001-7559-6572

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dead wood quantity and quality is important for forest biodiversity, by determining wood-inhabiting fungal assemblages. We therefore evaluated how fungal communities were regulated by stem traits and compartments (i.e. bark, outer- and inner wood) of 14 common temperate tree species. Fresh logs were incubated in a common garden experiment in a forest site in the Netherlands. After 1 and 4 years of decay, the fungal composition of different compartments was assessed using Internal Transcribed Spacer amplicon sequencing. We found that fungal alpha diversity differed significantly across tree species and stem compartments, with bark showing significantly higher fungal diversity than wood. Gymnosperms and Angiosperms hold different fungal communities, and distinct fungi were found between inner wood and other compartments. Stem traits showed significant afterlife effects on fungal communities; traits associated with accessibility (e.g. conduit diameter), stem chemistry (e.g. C, N, lignin) and physical defence (e.g. density) were important factors shaping fungal community structure in decaying stems. Overall, stem traits vary substantially across stem compartments and tree species, thus regulating fungal communities and the long-term carbon dynamics of dead trees.

Indexed as

MycobiomeTreesBiodiversityForestsFungiWood

Identifiers

PMID35229433
PMCPMC9544286

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.