Evidence map›Paper›PMID 35229102›Full record

ArticleThe Journal of antimicrobial chemotherapy2022

HIV-1 drug resistance mutations among individuals with low-level viraemia while taking combination ART in Botswana.

Ontlametse T Bareng, Sikhulile Moyo, Melissa Zahralban-Steele, Dorcas Maruapula, Tsotlhe Ditlhako, Baitshepi Mokaleng, Patrick Mokgethi, Wonderful T Choga, Natasha O Moraka, Molly Pretorius-Holme and 14 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01965470 (Botswana Combination Prevention Project), which is not on this map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01965470 phase4completednot on this map

Botswana Combination Prevention Project: -Evaluation Protocol (Protocol #1): Research Design and Impact Evaluation -Closed Clinical Cohort Protocol (Protocol #3) Implementation, Monitoring and Evaluation of Combination HIV Prevention Interventions in Rural and Peri-Urban Communities in Botswana

TypeinterventionalSponsorCenters for Disease Control and PreventionRan2013 to 2018ConditionsHIVArmsCombination Prevention, Enhanced Care
3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
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  6. HIV-1 Low-Level Viremia Predicts Viral Failure in Participants on Antiretroviral Therapy in the Swiss HIV Cohort Study.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 8 institutions in 3 countries.

Ontlametse T BarengBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Sikhulile MoyoBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Melissa Zahralban-SteeleDepartment of Immunology and Infectious Diseases, Harvard T. H. Chan School of Public Health, Boston, MA, USA.
Dorcas MaruapulaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Tsotlhe DitlhakoBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Baitshepi MokalengBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Patrick MokgethiBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Wonderful T ChogaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Natasha O MorakaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Molly Pretorius-HolmeDepartment of Immunology and Infectious Diseases, Harvard T. H. Chan School of Public Health, Boston, MA, USA.
Madisa O MineBotswana Ministry of Health and Wellness, Gaborone, Botswana.
Elliot RaizesU.S. Centers for Disease Control and Prevention, Atlanta, USA.ORCID 0000-0001-5121-877X
Kesaobaka MolebatsiBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Modisa S MotswalediSchool of Allied Health Professions, Faculty of Health Sciences, University of Botswana, Gaborone, Botswana.
Irene GobeSchool of Allied Health Professions, Faculty of Health Sciences, University of Botswana, Gaborone, Botswana.
Terence MohammedBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Tendani GaolatheBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Roger ShapiroBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Mompati MmalaneBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Joseph M MakhemaBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Shahin LockmanBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Max EssexBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Vlad NovitskyBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Simani GaseitsiweBotswana Harvard AIDS Institute Partnership, Gaborone, Botswana.
Harvard University · USBotswana Harvard AIDS Institute Partnership · BWUniversity of Botswana · BWBrigham and Women's Hospital · USCenters for Disease Control and Prevention · USMinistry of Health · BWStellenbosch University · ZAUniversity of Cape Town · ZA

Funding

H3ABioNet: a sustainable African Bioinformatics Network for H3AfricaU41HG006941 · NHGRI · UNIVERSITY OF CAPE TOWN · PI MULDER, NICOLA · 2012 to 2017
$14.8M
Training in HIV Genomics, Treatment, and Cure Research in BotswanaD43TW009610 · FIC · THE BOTSWANA HARVARD HEALTH PARTNERSHIP · PI SHAHIN LOCKMAN, Joseph Moeketsi Makhema · 2013 to 2026
$4.4M
AASAESABMGFCDC HHS U01 GH000447CGH CDC HHS U01 GH000447CGH CDC HHS U2G GH001911FIC NIH HHS 5D43TW009610FIC NIH HHS D43 TW009610H3AfricaMedical Research Council MC_UU_00027/1NEPAD 107752/Z/15/ZNHGRI NIH HHS U41 HG006941PEPFARSANTHE DEL-15-006Wellcome Trust
6 · The paper itself

Abstract

objectivesTo assess whether a single instance of low-level viraemia (LLV) is associated with the presence of drug resistance mutations (DRMs) and predicts subsequent virological failure (VF) in adults receiving ART in 30 communities participating in the Botswana Combination Prevention Project.

methodsA total of 6078 HIV-1 C pol sequences were generated and analysed using the Stanford HIV drug resistance database. LLV was defined as plasma VL = 51-999 copies/mL and VF was defined as plasma VL ≥ 1000 copies/mL.

resultsAmong 6078 people with HIV (PWH), 4443 (73%) were on ART for at least 6 months. Of the 332 persons on ART with VL > 50 copies/mL, 175 (4%) had VL ≥ 1000 copies/mL and 157 (4%) had LLV at baseline. The prevalence of any DRM was 57 (36%) and 78 (45%) in persons with LLV and VL ≥ 1000 copies/mL, respectively. Major DRMs were found in 31 (20%) with LLV and 53 (30%) with VL ≥ 1000 copies/mL (P = 0.04). Among the 135 PWH with at least one DRM, 17% had NRTI-, 35% NNRTI-, 6% PI- and 3% INSTI-associated mutations. Among the 3596 participants who were followed up, 1709 (48%) were on ART for ≥6 months at entry and had at least one subsequent VL measurement (median 29 months), 43 (3%) of whom had LLV. The OR of experiencing VF in persons with LLV at entry was 36-fold higher than in the virally suppressed group.

conclusionsA single LLV measurement while on ART strongly predicted the risk of future VF, suggesting the use of VL > 50 copies/mL as an indication for more intensive adherence support with more frequent VL monitoring.

Indexed as

Anti-HIV AgentsHIV-1HIV InfectionsHIV SeropositivityAdultBotswanaDrug ResistanceDrug Resistance, ViralHumansMutationViral LoadViremiaAnti-HIV Agents

Identifiers

PMID35229102
PMCPMC9633723
OpenAlexW4213087840

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.