Evidence map›Paper›PMID 35227290›Full record

ArticleGenome medicine2022

A pan-cancer landscape of telomeric content shows that RAD21 and HGF alterations are associated with longer telomeres.

Radwa Sharaf, Meagan Montesion, Julia F Hopkins, Jiarong Song, Garrett M Frampton, Lee A Albacker

Open access · goldAbstract read
In one paragraph

Article in Genome medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Radwa SharafFoundation Medicine Inc, 150 Second Street, Cambridge, MA, 02141, USA.
Meagan MontesionFoundation Medicine Inc, 150 Second Street, Cambridge, MA, 02141, USA.
Julia F HopkinsFoundation Medicine Inc, 150 Second Street, Cambridge, MA, 02141, USA.
Jiarong SongFoundation Medicine Inc, 150 Second Street, Cambridge, MA, 02141, USA.
Garrett M FramptonFoundation Medicine Inc, 150 Second Street, Cambridge, MA, 02141, USA.
Lee A AlbackerFoundation Medicine Inc, 150 Second Street, Cambridge, MA, 02141, USA. lalbacker@foundationmedicine.com.ORCID 0000-0002-5070-1783
Foundation Medicine (United States)Tech Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCancer cells can proliferate indefinitely through telomere maintenance mechanisms. These mechanisms include telomerase-dependent elongation, mediated by TERT activation, and alternative lengthening of telomeres (ALT), linked to loss of ATRX or DAXX.

methodsWe analyzed the telomeric content of 89,959 tumor samples within the Foundation Medicine dataset and investigated the genomic determinants of high telomeric content, linking them to clinical outcomes, when available.

resultsTelomeric content varied widely by disease type with leiomyosarcoma having the highest and Merkel cell carcinoma having the lowest telomeric content. In agreement with previous studies, telomeric content was significantly higher in samples with alterations in TERC, ATRX, and DAXX. We further identified that amplifications in two genes, RAD21 and HGF, were enriched in samples with high telomeric content, which was confirmed using the PCAWG/ICGC dataset. We identified the minimal amplified region associated with high telomeric content for RAD21 (8q23.1-8q24.12), which excludes MYC, and for HGF (7q21.11). Our results demonstrated that RAD21 and HGF exerted an additive telomere lengthening effect on samples with existing alterations in canonical genes previously associated with telomere elongation. Furthermore, patients with breast cancer who harbor RAD21 alterations had poor median overall survival and trended towards higher levels of Ki-67 staining.

conclusionsThis study highlights the importance of the role played by RAD21 (8q23.1-8q24.12) and HGF (7q21.11) in the lengthening of telomeres, supporting unlimited replication in tumors. These findings open avenues for work aimed at targeting this crucial pathway in tumorigenesis.

Indexed as

NeoplasmsTelomeraseCell Cycle ProteinsDNA-Binding ProteinsHepatocyte Growth FactorHumansTelomereTelomere HomeostasisX-linked Nuclear ProteinCell Cycle ProteinsDNA-Binding ProteinsHepatocyte Growth FactorHGF protein, humanRAD21 protein, humanTelomeraseX-linked Nuclear ProteinALTATRXBreastDAXXHGFRAD21TelomereTERCTERTTumor

Identifiers

PMID35227290
PMCPMC8883689
OpenAlexW4214627887

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.