Evidence map›Paper›PMID 35223903›Full record

ArticleFrontiers in medicine2022

ELP6 and PLIN5 Mutations Were Probably Prognostic Biomarkers for Patients With Gastric Cancer.

Ji Di, Yan Chai, Xin Yang, Haibin Dong, Bo Jiang, Faxiang Ji

Open access · goldAbstract read
In one paragraph

Article in Frontiers in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ji DiDepartment of Medical Oncology, Affiliated Hospital of Qinghai University, Xining, China.
Yan ChaiSchool of Clinical Medicine, Tsinghua University, Beijing, China.
Xin YangDepartment of Medical Oncology, Affiliated Hospital of Qinghai University, Xining, China.
Haibin DongDepartment of Gastroenterology, Tsinghua Changgeng Hospital, Tsinghua University, Beijing, China.
Bo JiangDepartment of Gastroenterology, Tsinghua Changgeng Hospital, Tsinghua University, Beijing, China.
Faxiang JiDepartment of Medical Oncology, Affiliated Hospital of Qinghai University, Xining, China.
Qinghai University Affiliated Hospital · CNTsinghua University · CNBeijing Tsinghua Chang Gung Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeGastric cancer (GC) is the fifth leading cancer around world. And prognosis of patients with GC is still undesirable. Our study aimed to explore potential prognostic biomarkers for patients with GC.

methodsThe clinical samples were collected from the Qinghai University Affiliated Hospital, which were subjected to the whole exome sequencing (WES). The other GC-related data were obtained from The Cancer Genome Atlas (TCGA) database. Cross analyses were done to determine the candidate genes. And the final mutated genes were determined by survival analyses, univariate and multivariate Cox regression analyses. CIBERSORT and GSEA were used for immune cell infiltration analysis and functional enrichment, respectively.

resultsAfter cross analyses, 160 candidate-mutated genes were identified. And mutated ELP6 and PLIN5 were significantly independently correlated with the overall survival (OS) of patients with GC. Patients with GC with ELP6 and PLIN5 mutations had worse and better prognosis, respectively. Totally 5 types of immune cells were significantly differentially infiltrated in wild-type and mutated ELP6 and PLIN5 GC samples. In mutated ELP6 and PLIN5 GC samples, totally 7 and 11 pathways were significantly enriched, respectively.

conclusionsThe ELP6 and PLIN5 mutations were probably prognostic biomarkers for patients with GC.

Indexed as

ELP6 mutationgastric cancerPLIN5 mutationprognosiswhole exome sequencing

Identifiers

PMID35223903
PMCPMC8864479
OpenAlexW4210845292

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