Evidence map›Paper›PMID 35222328›Full record

ArticleFrontiers in microbiology2022

Diversity and Ecological Guild Analysis of the Oil Palm Fungal Microbiome Across Root, Rhizosphere, and Soil Compartments.

Eleanor R Kirkman, Sally Hilton, Gomathy Sethuraman, Dafydd M O Elias, Andrew Taylor, John Clarkson, Aik Chin Soh, David Bass, Gin Teng Ooi, Niall P McNamara and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Palm Fungi and Their Key Role in Biodiversity Surveys: A Review.Journal of fungi (Basel, Switzerland) · 2023
    Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Eleanor R KirkmanSchool of Life Sciences, University of Warwick, Coventry, United Kingdom.
Sally HiltonSchool of Life Sciences, University of Warwick, Coventry, United Kingdom.
Gomathy SethuramanCrops for the Future Research Centre, Semenyih, Malaysia.
Dafydd M O EliasUK Centre for Ecology & Hydrology, Lancaster Environment Centre, Bailrigg, United Kingdom.
Andrew TaylorSchool of Life Sciences, University of Warwick, Coventry, United Kingdom.
John ClarksonSchool of Life Sciences, University of Warwick, Coventry, United Kingdom.
Aik Chin SohCrops for the Future Research Centre, Semenyih, Malaysia.
David BassDepartment of Life Sciences, Natural History Museum, London, United Kingdom.
Gin Teng OoiCrops for the Future Research Centre, Semenyih, Malaysia.
Niall P McNamaraUK Centre for Ecology & Hydrology, Lancaster Environment Centre, Bailrigg, United Kingdom.
Gary D BendingSchool of Life Sciences, University of Warwick, Coventry, United Kingdom.
University of Warwick · GBUK Centre for Ecology & Hydrology · GBCentre for Environment, Fisheries and Aquaculture Science · GBUniversity of Malaya · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rhizosphere microbiome is a major determinant of plant health, which can interact with the host directly and indirectly to promote or suppress productivity. Oil palm is one of the world's most important crops, constituting over a third of global vegetable oil production. Currently there is little understanding of the oil palm microbiome and its contribution to plant health and productivity, with existing knowledge based almost entirely on culture dependent studies. We investigated the diversity and composition of the oil palm fungal microbiome in the bulk soil, rhizosphere soil, and roots of 2-, 18-, and 35-year old plantations in Selangor, Malaysia. The fungal community showed substantial variation between the plantations, accounting for 19.7% of community composition, with compartment (root, rhizosphere soil, and bulk soil), and soil properties (pH, C, N, and P) contributing 6.5 and 7.2% of community variation, respectively. Rhizosphere soil and roots supported distinct communities compared to the bulk soil, with significant enrichment of Agaricomycetes, Glomeromycetes, and Lecanoromycetes in roots. Several putative plant pathogens were abundant in roots in all the plantations, including taxa related to

Indexed as

arbuscular mycorrhizal fungifungioil palmpathogenrhizosphereroottropical

Identifiers

PMID35222328
PMCPMC8874247
OpenAlexW4211181130

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.