Evidence map›Paper›PMID 35220421›Full record

ArticleHuman molecular genetics2022

Non-canonical initiation factors modulate repeat-associated non-AUG translation.

Katelyn M Green, Shannon L Miller, Indranil Malik, Peter K Todd

Open access · greenAbstract read
In one paragraph

Article in Human molecular genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Katelyn M GreenDepartment of Neurology, University of Michigan, Ann Arbor, MI, USA.
Shannon L MillerDepartment of Neurology, University of Michigan, Ann Arbor, MI, USA.
Indranil MalikDepartment of Neurology, University of Michigan, Ann Arbor, MI, USA.
Peter K ToddDepartment of Neurology, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0003-4781-6376
University of Michigan · US

Funding

CELLULAR AND MOLECULAR BIOLOGY AT MICHIGANT32GM007315 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PUTHENVEEDU, MANOJKUMAR A · 1985 to 2021
$12.8M
The FMR1 CGG repeat as functional element and therapeutic target in Fragile X associated disordersP50HD104463 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI ALLEN, EMILY GRAVES · 2020 to 2024
$9.0M
Hexanucleotide repeat translation in ALS and Frontotemporal DementiaR01NS099280 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Peter K Todd · 2016 to 2026
$4.9M
Cellular and Molecular Biology at MichiganT32GM145470 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI John Chadwick Brenner · 2022 to 2026
$4.1M
CGG repeat associated translation in Fragile X-associated Tremor/Ataxia Syndrome-Diversity SupplementR01NS086810 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TODD, PETER K · 2014 to 2024
$4.1M
Determining the role of RNA-based factors in RAN translation of C9ALS/FTD-associated GGGGCC repeatsF31NS100302 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GREEN, KATELYN MARIE · 2017 to 2019
$125k
Determining the Mechanism of RAN Translation in C9orf72-Associated ALS/FTDF31NS127371 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MILLER, SHANNON LYNNE · 2022 to 2024
$123k
Bypassing cellular stress pathways in frontotemporal dementia and ALSI01BX004842 · VA · VETERANS HEALTH ADMINISTRATION · PI TODD, PETER K · 2020 to 2023
–
BLRD VA I01 BX004842NICHD NIH HHS P50 HD104463NIGMS NIH HHS T32 GM007315NIGMS NIH HHS T32 GM145470NINDS NIH HHS F31 NS100302NINDS NIH HHS F31 NS127371NINDS NIH HHS R01 NS086810NINDS NIH HHS R01 NS099280
6 · The paper itself

Abstract

Repeat-associated non-AUG (RAN) translation of expanded repeat-mutation mRNA produces toxic peptides in neurons of patients suffering from neurodegenerative diseases. Recent findings indicate that RAN translation in diverse model systems is not inhibited by cellular stressors that impair global translation through phosphorylation of the alpha subunit of eIF2, the essential eukaryotic translation initiation factor that brings the initiator tRNA to the 40S ribosome. Using in vitro, cell-based and Drosophila models, we examined the role of alternative ternary complex factors that may function in place of eIF2, including eIF2A, eIF2D, DENR and MCTS1. Among these factors, DENR knockdown had the greatest inhibitory effect on RAN translation of expanded GGGGCC and CGG repeat reporters and its reduction improved the survival of Drosophila expressing expanded GGGGCC repeats. Taken together, these data support a role for alternative initiation factors in RAN translation and suggest these may serve as novel therapeutic targets in neurodegenerative disease.

Indexed as

Drosophila ProteinsNeurodegenerative DiseasesAnimalsDrosophilaEukaryotic Initiation Factor-2Eukaryotic Initiation FactorsProtein BiosynthesisRibosomesRNA, MessengerDENR protein, DrosophilaDrosophila ProteinsEukaryotic Initiation Factor-2Eukaryotic Initiation FactorsRNA, Messenger

Identifiers

PMID35220421
PMCPMC9618161
OpenAlexW4210793981

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.