Evidence map›Paper›PMID 35218268›Full record

ArticleThe Plant journal : for cell and molecular biology2022

Mutations that alter Arabidopsis flavonoid metabolism affect the circadian clock.

Sherry B Hildreth, Evan S Littleton, Leor C Clark, Gabrielle C Puller, Shihoko Kojima, Brenda S J Winkel

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 75 citations in OpenAlex.

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  16. Pinoresinol rescues developmental phenotypes of Arabidopsis phenylpropanoid mutants overexpressingProceedings of the National Academy of Sciences of the United States of America · 2023
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  17. Comparative Transcriptomics of Multi-Stress Responses inInternational journal of molecular sciences · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sherry B Hildreth *Department of Biological Sciences, Virginia Tech, Blacksburg, VA, 24061, USA.
Evan S Littleton *Department of Biological Sciences, Virginia Tech, Blacksburg, VA, 24061, USA.ORCID 0000-0003-2335-025X
Leor C ClarkDepartment of Biological Sciences, Virginia Tech, Blacksburg, VA, 24061, USA.
Gabrielle C PullerDepartment of Biological Sciences, Virginia Tech, Blacksburg, VA, 24061, USA.
Shihoko KojimaDepartment of Biological Sciences, Virginia Tech, Blacksburg, VA, 24061, USA.ORCID 0000-0001-9579-7830
Brenda S J WinkelDepartment of Biological Sciences, Virginia Tech, Blacksburg, VA, 24061, USA.ORCID 0000-0003-3481-024X
Virginia Tech · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Flavonoids are a well-known class of specialized metabolites that play key roles in plant development, reproduction, and survival. Flavonoids are also of considerable interest from the perspective of human health, as both phytonutrients and pharmaceuticals. RNA sequencing analysis of an Arabidopsis null allele for chalcone synthase (CHS), which catalyzes the first step in flavonoid metabolism, has uncovered evidence that these compounds influence the expression of genes associated with the plant circadian clock. Analysis of promoter-luciferase constructs further showed that the transcriptional activity of CCA1 and TOC1, two key clock genes, is altered in CHS-deficient seedlings across the day/night cycle. Similar findings for a mutant line lacking flavonoid 3'-hydroxylase (F3'H) activity, and thus able to synthesize mono- but not dihydroxylated B-ring flavonoids, suggests that the latter are at least partially responsible; this was further supported by the ability of quercetin to enhance CCA1 promoter activity in wild-type and CHS-deficient seedlings. The effects of flavonoids on circadian function were also reflected in photosynthetic activity, with chlorophyll cycling abolished in CHS- and F3'H-deficient plants. Remarkably, the same phenotype was exhibited by plants with artificially high flavonoid levels, indicating that neither the antioxidant potential nor the light-screening properties of flavonoids contribute to optimal clock function, as has recently also been demonstrated in animal systems. Collectively, the current experiments point to a previously unknown connection between flavonoids and circadian cycling in plants and open the way to better understanding of the molecular basis of flavonoid action.

Indexed as

ArabidopsisArabidopsis ProteinsCircadian ClocksCircadian RhythmFlavonoidsGene Expression Regulation, PlantMutationSeedlingsArabidopsis ProteinsFlavonoidsArabidopsis thalianaCCA1chlorophyllcircadian clockflavonoidsluciferasequercetinTOC1tt4tt7

Identifiers

PMID35218268
PMCPMC9311810
OpenAlexW4214484833

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.