Evidence map›Paper›PMID 35218187›Full record

ArticleJournal of industrial microbiology & biotechnology2022

Reverse β-oxidation pathways for efficient chemical production.

Katia Tarasava, Seung Hwan Lee, Jing Chen, Michael Köpke, Michael C Jewett, Ramon Gonzalez

Abstract read
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Engineering New-to-Nature Biological Pathways for β,γ-Alkanediol Synthesis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Katia TarasavaDepartment of Chemical, Biological, and Materials Engineering, University of South Florida, 4202 E. Fowler Ave., Tampa, FL 33620, USA.
Seung Hwan LeeDepartment of Chemical, Biological, and Materials Engineering, University of South Florida, 4202 E. Fowler Ave., Tampa, FL 33620, USA.
Jing ChenDepartment of Chemical, Biological, and Materials Engineering, University of South Florida, 4202 E. Fowler Ave., Tampa, FL 33620, USA.
Michael KöpkeLanzaTech Inc., Skokie, IL 60077, USA.
Michael C JewettDepartment of Chemical and Biological Engineering and Center for Synthetic Biology, Northwestern University, Evanston, IL 60208, USA.
Ramon GonzalezDepartment of Chemical, Biological, and Materials Engineering, University of South Florida, 4202 E. Fowler Ave., Tampa, FL 33620, USA.ORCID 0000-0003-4797-6580

Funding

National Science Foundation CBET- 1805793U.S. Department of Energy DE-EE0008499
6 · The paper itself

Abstract

Microbial production of fuels, chemicals, and materials has the potential to reduce greenhouse gas emissions and contribute to a sustainable bioeconomy. While synthetic biology allows readjusting of native metabolic pathways for the synthesis of desired products, often these native pathways do not support maximum efficiency and are affected by complex regulatory mechanisms. A synthetic or engineered pathway that allows modular synthesis of versatile bioproducts with minimal enzyme requirement and regulation while achieving high carbon and energy efficiency could be an alternative solution to address these issues. The reverse β-oxidation (rBOX) pathways enable iterative non-decarboxylative elongation of carbon molecules of varying chain lengths and functional groups with only four core enzymes and no ATP requirement. Here, we describe recent developments in rBOX pathway engineering to produce alcohols and carboxylic acids with diverse functional groups, along with other commercially important molecules such as polyketides. We discuss the application of rBOX beyond the pathway itself by its interfacing with various carbon-utilization pathways and deployment in different organisms, which allows feedstock diversification from sugars to glycerol, carbon dioxide, methane, and other substrates.

Indexed as

Carboxylic AcidsSynthetic BiologyAlcoholsMetabolic EngineeringMetabolic Networks and PathwaysOxidation-ReductionAlcoholsCarboxylic AcidsMetabolic engineeringReverse β-oxidation

Identifiers

PMID35218187
PMCPMC9118988

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.