Evidence map›Paper›PMID 35217619›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Chaperones Skp and SurA dynamically expand unfolded OmpX and synergistically disassemble oligomeric aggregates.

Neharika Chamachi, Andreas Hartmann, Mai Quynh Ma, Anna Svirina, Georg Krainer, Michael Schlierf

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Neharika ChamachiB CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, 01307 Dresden, Germany.ORCID 0000-0002-4657-9092
Andreas HartmannB CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, 01307 Dresden, Germany.ORCID 0000-0002-2213-2763
Mai Quynh MaB CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, 01307 Dresden, Germany.ORCID 0000-0002-0598-1966
Anna SvirinaB CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, 01307 Dresden, Germany.
Georg KrainerB CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, 01307 Dresden, Germany; gk422@cam.ac.uk michael.schlierf@tu-dresden.de.ORCID 0000-0002-9626-7636
Michael SchlierfB CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, 01307 Dresden, Germany; gk422@cam.ac.uk michael.schlierf@tu-dresden.de.ORCID 0000-0002-6209-2364
Technische Universität Dresden · DEUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Periplasmic chaperones 17-kilodalton protein (Skp) and survival factor A (SurA) are essential players in outer membrane protein (OMP) biogenesis. They prevent unfolded OMPs from misfolding during their passage through the periplasmic space and aid in the disassembly of OMP aggregates under cellular stress conditions. However, functionally important links between interaction mechanisms, structural dynamics, and energetics that underpin both Skp and SurA associations with OMPs have remained largely unresolved. Here, using single-molecule fluorescence spectroscopy, we dissect the conformational dynamics and thermodynamics of Skp and SurA binding to unfolded OmpX and explore their disaggregase activities. We show that both chaperones expand unfolded OmpX distinctly and induce microsecond chain reconfigurations in the client OMP structure. We further reveal that Skp and SurA bind their substrate in a fine-tuned thermodynamic process via enthalpy-entropy compensation. Finally, we observed synergistic activity of both chaperones in the disaggregation of oligomeric OmpX aggregates. Our findings provide an intimate view into the multifaceted functionalities of Skp and SurA and the fine-tuned balance between conformational flexibility and underlying energetics in aiding chaperone action during OMP biogenesis.

Indexed as

Bacterial Outer Membrane ProteinsBiopolymersFluorescence Resonance Energy TransferMolecular ChaperonesProtein ConformationBacterial Outer Membrane ProteinsBiopolymersMolecular Chaperoneschaperonesdisaggregationouter membrane protein biogenesisprotein foldingsingle-molecule FRET

Identifiers

PMID35217619
PMCPMC8892499
OpenAlexW4214760918

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.