Evidence map›Paper›PMID 35215133›Full record

ArticlePathogens (Basel, Switzerland)2022

Dynamic Transcriptome Profiling of Mungbean Genotypes Unveil the Genes Respond to the Infection of Mungbean Yellow Mosaic Virus.

Manickam Sudha, Adhimoolam Karthikeyan, Balasubramaniam Madhumitha, Rajagopalan Veera Ranjani, Mayalagu Kanimoli Mathivathana, Manickam Dhasarathan, Jayakodi Murukarthick, Madiha Natchi Samu Shihabdeen, Karuppiah Eraivan Arutkani Aiyanathan, Muthaiyan Pandiyan and 2 more

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. ComparativeFrontiers in genetics · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Manickam SudhaDepartment of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India.
Adhimoolam KarthikeyanDepartment of Biotechnology, Centre of Innovation, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai 625104, Tamil Nadu, India.ORCID 0000-0002-6270-5597
Balasubramaniam MadhumithaDepartment of Plant Pathology, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai 625104, Tamil Nadu, India.
Rajagopalan Veera RanjaniDepartment of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India.ORCID 0000-0002-2875-5451
Mayalagu Kanimoli MathivathanaDepartment of Plant Breeding and Genetics, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai 625104, Tamil Nadu, India.
Manickam DhasarathanAgroclimate Research Centre, Directorate of Crop Management, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India.
Jayakodi MurukarthickGene Bank, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Stadt See land, 06466 Seeland, OT Gatersleben, Germany.ORCID 0000-0003-2951-0541
Madiha Natchi Samu ShihabdeenDepartment of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India.ORCID 0000-0002-4768-0854
Karuppiah Eraivan Arutkani AiyanathanAgricultural College and Research Institute, Tamil Nadu Agricultural University, Killikulam 628252, Tamil Nadu, India.
Muthaiyan PandiyanRegional Research Station, Tamil Nadu Agricultural University, Virudhachalam 606001, Tamil Nadu, India.
Natesan SenthilDepartment of Plant Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India.ORCID 0000-0002-2930-0715
Muthurajan RaveendranDepartment of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India.ORCID 0000-0002-8803-7662

Funding

Department of Science & Technology DST/CPMB/CBE/DPB/2016/R023
6 · The paper itself

Abstract

Yellow mosaic disease (YMD), incited by mungbean yellow mosaic virus (MYMV), is a primary viral disease that reduces mungbean production in South Asia, especially in India. There is no detailed knowledge regarding the genes and molecular mechanisms conferring resistance of mungbean to MYMV. Therefore, disclosing the genetic and molecular bases related to MYMV resistance helps to develop the mungbean genotypes with MYMV resistance. In this study, transcriptomes of mungbean genotypes, VGGRU-1 (resistant) and VRM (Gg) 1 (susceptible) infected with MYMV were compared to those of uninfected controls. The number of differentially expressed genes (DEGs) in the resistant and susceptible genotypes was 896 and 506, respectively. Among them, 275 DEGs were common between the resistant and susceptible genotypes. Functional annotation of DEGs revealed that the DEGs belonged to the following categories defense and pathogenesis, receptor-like kinases; serine/threonine protein kinases, hormone signaling, transcription factors, and chaperons, and secondary metabolites. Further, we have confirmed the expression pattern of several DEGs by quantitative real-time PCR (qRT-PCR) analysis. Collectively, the information obtained in this study unveils the new insights into characterizing the MYMV resistance and paved the way for breeding MYMV resistant mungbean in the future.

Indexed as

mungbeanRNA seqwhiteflyyellow mosaic disease

Identifiers

PMID35215133
PMCPMC8874377

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.