Evidence map›Paper›PMID 35212634›Full record

ArticleJMIR medical informatics2022

Automatically Explaining Machine Learning Predictions on Severe Chronic Obstructive Pulmonary Disease Exacerbations: Retrospective Cohort Study.

Siyang Zeng, Mehrdad Arjomandi, Gang Luo

Open access · goldAbstract read
In one paragraph

Article in JMIR medical informatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Trial
  2. Article
  3. Exacerbations of COPD.Respiratory care · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Siyang ZengDepartment of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, United States.ORCID https://orcid.org/0000-0001-9346-301X
Mehrdad ArjomandiMedical Service, San Francisco Veterans Affairs Medical Center, San Francisco, CA, United States.ORCID https://orcid.org/0000-0002-0116-9217
Gang LuoDepartment of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA, United States.ORCID https://orcid.org/0000-0001-7217-4008
University of Washington Medical Center · USSan Francisco VA Medical Center · US

Funding

University of Washington Biomedical Informatics and Data Science Research Training ProgramT15LM007442 · NLM · UNIVERSITY OF WASHINGTON · PI JOHN H. GENNARI, Andrea L. Hartzler · 2002 to 2026
$19.6M
Using Computational Approaches to Optimize Asthma Care ManagementR01HL142503 · NHLBI · UNIVERSITY OF WASHINGTON · PI LUO, GANG · 2018 to 2021
$3.3M
NHLBI NIH HHS R01 HL142503NLM NIH HHS T15 LM007442
6 · The paper itself

Abstract

backgroundChronic obstructive pulmonary disease (COPD) is a major cause of death and places a heavy burden on health care. To optimize the allocation of precious preventive care management resources and improve the outcomes for high-risk patients with COPD, we recently built the most accurate model to date to predict severe COPD exacerbations, which need inpatient stays or emergency department visits, in the following 12 months. Our model is a machine learning model. As is the case with most machine learning models, our model does not explain its predictions, forming a barrier for clinical use. Previously, we designed a method to automatically provide rule-type explanations for machine learning predictions and suggest tailored interventions with no loss of model performance. This method has been tested before for asthma outcome prediction but not for COPD outcome prediction.

objectiveThis study aims to assess the generalizability of our automatic explanation method for predicting severe COPD exacerbations.

methodsThe patient cohort included all patients with COPD who visited the University of Washington Medicine facilities between 2011 and 2019. In a secondary analysis of 43,576 data instances, we used our formerly developed automatic explanation method to automatically explain our model's predictions and suggest tailored interventions.

resultsOur method explained the predictions for 97.1% (100/103) of the patients with COPD whom our model correctly predicted to have severe COPD exacerbations in the following 12 months and the predictions for 73.6% (134/182) of the patients with COPD who had ≥1 severe COPD exacerbation in the following 12 months.

conclusionsOur automatic explanation method worked well for predicting severe COPD exacerbations. After further improving our method, we hope to use it to facilitate future clinical use of our model. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID): RR2-10.2196/13783.

Indexed as

chronic obstructive pulmonary diseaseforecastingmachine learningpatient care management

Identifiers

PMID35212634
PMCPMC8917430
OpenAlexW4214527673

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.