Evidence map›Paper›PMID 35211985›Full record

ArticleJournal of medical virology2022

Detection and isolation of SARS-CoV-2 Eta variant from the international travelers and local residents of India.

Pragya D Yadav, Dimpal A Nyayanit, Nivedita Gupta, Jayanthi Shastri, Rima R Sahay, Deepak Y Patil, Anita M Shete, Alpana Razdan, Sachee Agrawal, Abhinendra Kumar and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of medical virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Pragya D YadavIndian Council of Medical Research-National Institute of Virology, Pune, India.ORCID 0000-0002-0861-7166
Dimpal A NyayanitIndian Council of Medical Research-National Institute of Virology, Pune, India.
Nivedita GuptaIndian Council of Medical Research, V. Ramalingaswami Bhawan, New Delhi, India.
Jayanthi ShastriMolecular Diagnostic Reference Laboratory, Kasturba Hospital for Infectious Diseases, Mumbai, India.
Rima R SahayIndian Council of Medical Research-National Institute of Virology, Pune, India.
Deepak Y PatilIndian Council of Medical Research-National Institute of Virology, Pune, India.
Anita M SheteIndian Council of Medical Research-National Institute of Virology, Pune, India.
Alpana RazdanGenestrings Diagnostic Centre Pvt. Ltd, New Delhi, India.
Sachee AgrawalMolecular Diagnostic Reference Laboratory, Kasturba Hospital for Infectious Diseases, Mumbai, India.
Abhinendra KumarIndian Council of Medical Research-National Institute of Virology, Pune, India.
Triparna MajumdarIndian Council of Medical Research-National Institute of Virology, Pune, India.
Savita PatilIndian Council of Medical Research-National Institute of Virology, Pune, India.
Prasad SarkaleIndian Council of Medical Research-National Institute of Virology, Pune, India.
Shreekant BaradkarIndian Council of Medical Research-National Institute of Virology, Pune, India.
Manisha DudhmalIndian Council of Medical Research-National Institute of Virology, Pune, India.
Harmanmeet KaurIndian Council of Medical Research, V. Ramalingaswami Bhawan, New Delhi, India.
Neeraj AggarwalIndian Council of Medical Research, V. Ramalingaswami Bhawan, New Delhi, India.ORCID 0000-0003-3139-2994
ICMR-National Institute of Virology · INIndian Council of Medical Research · INKasturba Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

International travel has been the major source for the rapid spread of new SARS-CoV-2 variants across the globe. During SARS-CoV-2 genomic surveillance, a total of 212 SARS-CoV-2 positive clinical specimens were sequenced using next-generation sequencing. A complete SARS-CoV-2 genome could be retrieved from 90 clinical specimens. Of them, 14 sequences belonged to the Eta variant from clinical specimens of international travelers (n = 12) and local residents (n = 2) of India, and 76 belonged to other SARS-CoV-2 variants. Of all the Eta-positive specimens, the virus isolates were obtained from the clinical specimens of six international travelers. Many variants of interest have been found to cause substantial community transmission or cluster infections. The detection of this variant with lethal E484K mutation across the globe and India necessitates persistent genomic surveillance of the SARS-CoV-2 variants, which would aid in taking preventive action.

Indexed as

COVID-19SARS-CoV-2High-Throughput Nucleotide SequencingHumansMutationEtaIndiaSARS-CoV-2variant under monitoring

Identifiers

PMID35211985
PMCPMC9088542
OpenAlexW4214483806

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.