Evidence map›Paper›PMID 35210580›Full record

ArticleNature ecology & evolution2022

Domestication reprogrammed the budding yeast life cycle.

Matteo De Chiara, Benjamin P Barré, Karl Persson, Agurtzane Irizar, Chiara Vischioni, Sakshi Khaiwal, Simon Stenberg, Onyetugo Chioma Amadi, Gašper Žun, Katja Doberšek and 5 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature ecology & evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
11.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 79 citations in OpenAlex.

  1. Article
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  5. Seven draft genomes ofMicrobiology resource announcements · 2026
    Article
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  8. Domestication drives repeated evolution of sexual-asexual life cycle trade-offs in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. Repeated losses of self-fertility shaped heterozygosity and polyploidy in yeast evolution.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 6 countries.

Matteo De Chiara *Université Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France. matteo.de-chiara@univ-cotedazur.fr.ORCID http://orcid.org/0000-0003-1014-350X
Benjamin P Barré *Université Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France.ORCID http://orcid.org/0000-0002-3649-612X
Karl PerssonDepartment of Chemistry and Molecular Biology, Gothenburg University, Gothenburg, Sweden.ORCID http://orcid.org/0000-0002-2173-8165
Agurtzane IrizarUniversité Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France.
Chiara VischioniUniversité Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France.
Sakshi KhaiwalUniversité Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France.
Simon StenbergDepartment of Chemistry and Molecular Biology, Gothenburg University, Gothenburg, Sweden.ORCID http://orcid.org/0000-0003-0300-1730
Onyetugo Chioma AmadiDepartment of Chemistry and Molecular Biology, Gothenburg University, Gothenburg, Sweden.
Gašper ŽunDepartment of Molecular and Biomedical Sciences, Jožef Stefan Institute, Ljubljana, Slovenia.
Katja DoberšekDepartment of Molecular and Biomedical Sciences, Jožef Stefan Institute, Ljubljana, Slovenia.
Cristian TaccioliDepartment of Animal Medicine, Production and Health, University of Padova, Legnaro, Italy.ORCID http://orcid.org/0000-0003-2995-5612
Joseph SchachererUniversité de Strasbourg, CNRS, GMGM UMR, Strasbourg, France.
Uroš PetrovičDepartment of Molecular and Biomedical Sciences, Jožef Stefan Institute, Ljubljana, Slovenia.ORCID http://orcid.org/0000-0002-9743-9145
Jonas WarringerDepartment of Chemistry and Molecular Biology, Gothenburg University, Gothenburg, Sweden. jonas.warringer@cmb.gu.se.ORCID http://orcid.org/0000-0001-6144-2740
Gianni LitiUniversité Côte d'Azur, CNRS, INSERM, IRCAN, Nice, France. gianni.liti@unice.fr.ORCID http://orcid.org/0000-0002-2318-0775
Centre National de la Recherche Scientifique · FRUniversity of Gothenburg · SEUniversity of Ljubljana · SIBrigham and Women's Hospital · USJožef Stefan Institute · SIUniversity of Nigeria · NGUniversity of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Domestication of plants and animals is the foundation for feeding the world human population but can profoundly alter the biology of the domesticated species. Here we investigated the effect of domestication on one of our prime model organisms, the yeast Saccharomyces cerevisiae, at a species-wide level. We tracked the capacity for sexual and asexual reproduction and the chronological life span across a global collection of 1,011 genome-sequenced yeast isolates and found a remarkable dichotomy between domesticated and wild strains. Domestication had systematically enhanced fermentative and reduced respiratory asexual growth, altered the tolerance to many stresses and abolished or impaired the sexual life cycle. The chronological life span remained largely unaffected by domestication and was instead dictated by clade-specific evolution. We traced the genetic origins of the yeast domestication syndrome using genome-wide association analysis and genetic engineering and disclosed causative effects of aneuploidy, gene presence/absence variations, copy number variations and single-nucleotide polymorphisms. Overall, we propose domestication to be the most dramatic event in budding yeast evolution, raising questions about how much domestication has distorted our understanding of the natural biology of this key model species.

Indexed as

DomesticationSaccharomycetalesAnimalsDNA Copy Number VariationsGenome-Wide Association StudyLife Cycle StagesSaccharomyces cerevisiae

Identifiers

PMID35210580
OpenAlexW4213432144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.