Evidence map›Paper›PMID 35208747›Full record

ArticleMicroorganisms2022

Correlation between Phenotypic and In Silico Detection of Antimicrobial Resistance in

Amrita Bharat, Aaron Petkau, Brent P Avery, Jessica C Chen, Jason P Folster, Carolee A Carson, Ashley Kearney, Celine Nadon, Philip Mabon, Jeffrey Thiessen and 13 more

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed, 1 pooled it
14.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed, 1 synthesis or guideline pooled it, 208 citations in OpenAlex.

  1. Pooled it
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  18. A Survey of the Microbiome, Culturome and ARG Profile of a Cohort of Chronic Diabetic Foot Lesions.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2026
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  20. Whole Genome Sequencing Reveals Genetic Variability ofAntibiotics (Basel, Switzerland) · 2026
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87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 9 institutions in 2 countries.

Amrita BharatNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB R3E 3R2, Canada.ORCID 0000-0003-4171-9436
Aaron PetkauNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB R3E 3R2, Canada.
Brent P AveryCentre for Food-Borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Guelph, ON K1A 0K9, Canada.
Jessica C ChenUnited States Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Jason P FolsterUnited States Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Carolee A CarsonCentre for Food-Borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Guelph, ON K1A 0K9, Canada.ORCID 0000-0003-2712-0961
Ashley KearneyNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB R3E 3R2, Canada.
Celine NadonNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB R3E 3R2, Canada.
Philip MabonNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB R3E 3R2, Canada.
Jeffrey ThiessenNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB R3E 3R2, Canada.
David C AlexanderCadham Provincial Laboratory, Winnipeg, MB R3E 3J7, Canada.
Vanessa AllenPublic Health Ontario Laboratories, Toronto, ON M5G 1M1, Canada.
Sameh El BaileyHorizon Health Network, Saint John, NB E2L 4L2, Canada.
Sadjia BekalLaboratoire de Santé Publique du Québec, Sainte-Anne-de-Bellevue, QC H9X 3R5, Canada.
Greg J GermanQueen Elizabeth Hospital, Charlottetown, PE C1A 8T5, Canada.
David HaldaneQueen Elizabeth II Health Sciences Centre, Halifax, NS B3H 2Y9, Canada.
Linda HoangBritish Columbia Center for Disease Control, Vancouver, BC V5Z 4R4, Canada.
Linda ChuiAlberta Precision Laboratories: Public Health Laboratory (ProvLab), Edmonton, AB T6G 2J2, Canada.
Jessica MinionRoy Romanow Provincial Laboratory, Regina, SK S4S 5W6, Canada.
George ZahariadisNewfoundland and Labrador Public Health and Microbiology Laboratory, St. John's, NL A1A 3Z9, Canada.
Gary Van DomselaarNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB R3E 3R2, Canada.
Richard J Reid-SmithCentre for Food-Borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, Guelph, ON K1A 0K9, Canada.
Michael R MulveyNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB R3E 3R2, Canada.
Public Health Agency of Canada · CACenters for Disease Control and Prevention · USBC Centre for Disease Control · CAHorizon Health Network · CAQueen Elizabeth II Health Sciences Centre · CASaskatchewan Disease Control Laboratory · CASte. Anne's Hospital · CAToronto Public Health · CAUniversity of Alberta · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whole genome sequencing (WGS) of

Indexed as

AMR predictionantimicrobial resistancemolecular epidemiologySalmonellawhole-genome sequencing

Identifiers

PMID35208747
PMCPMC8875511
OpenAlexW4210476749

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.