Evidence map›Paper›PMID 35208712›Full record

ArticleMicroorganisms2022

Host Cyanobacteria Killing by Novel Lytic Cyanophage YongM: A Protein Profiling Analysis.

Shanshan Zhang, Baohua Zhao, Jing Li, Xiaofei Song, Yigang Tong, Wenlin An

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Shanshan ZhangCollege of Life Science, Hebei Normal University, Shijiazhuang 050024, China.
Baohua ZhaoCollege of Life Science, Hebei Normal University, Shijiazhuang 050024, China.
Jing LiCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China.
Xiaofei SongCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China.
Yigang TongCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China.
Wenlin AnCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, China.
Beijing University of Chemical Technology · CNHebei Normal University · CN

Funding

Inner Mongolia Key Research and Development Program 2019ZD006National Key Research and Development Program of China 19SWAQ06National Key Research and Development Program of China 2018YFA0903000National Key Research and Development Program of China 2020YFA0712100National Key Research and Development Program of China 2020YFC0840805National Key Research and Development Program of China 2020YFC2005405National Key Research and Development Program of China 20SWAQK22National Key Research and Development Program of China 20SWAQX27NSFC-MFST project (China-Mongolia) 31961143024
6 · The paper itself

Abstract

Cyanobacteria are autotrophic prokaryotes that can proliferate robustly in eutrophic waters through photosynthesis. This can lead to outbreaks of lake "water blooms", which result in water quality reduction and environmental pollution that seriously affect fisheries and aquaculture. The use of cyanophages to control the growth of cyanobacteria is an important strategy to tackle annual cyanobacterial blooms. YongM is a novel lytic cyanophage with a broad host spectrum and high efficiency in killing its host, cyanobacteria FACHB-596. However, changes in cyanophage protein profile during infestation and killing of the host remains unknown. To characterize the proteins and its regulation networks involved in the killing of host cyanobacteria by YongM and evaluate whether this strain YongM could be used as a chassis for further engineering to be a powerful tool in dealing with cyanobacterial blooms, we herein applied 4D label-free high-throughput quantitative proteomics to analyze differentially expressed proteins (DEPs) involved in cyanobacteria host response infected 1 and 8 h with YongM cyanophage. Metabolic pathways, such as photosynthesis, photosynthesis-antennal protein, oxidative phosphorylation, ribosome, carbon fixation, and glycolysis/glycol-isomerization were significantly altered in the infested host, whereas DEPs were associated with the metabolic processes of photosynthesis, precursor metabolites, energy production, and organic nitrogen compounds. Among these DEPs, key proteins involved in YongM-host interaction may be photosystem I P700 chlorophyll-a apolipoprotein, carbon dioxide concentration mechanism protein, cytochrome B, and some YongM infection lysis-related enzymes. Our results provide comprehensive information of protein profiles during the invasion and killing of host cyanobacteria by its cyanophage, which may shed light on future design and manipulation of artificial cyanophages against water blooms.

Indexed as

cyanophageenergy metabolismlabel-free quantitative proteomicsNostoc sp.photosynthesissubstance metabolism

Identifiers

PMID35208712
PMCPMC8875764
OpenAlexW4210356031

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.