Article in Journal of personalized medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.
0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 50% of its field
1 · What the graph read from it
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
2 · The registry
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
3 · Its place in the literature
Who cites it
2 citing papers in PubMed, 4 citations in OpenAlex.
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
5 · Who and what money
Authors and funding
36 authors at 16 institutions in 10 countries.
Houcemeddine OthmanSydney Brenner Institute for Molecular Bioscience, Faculty of Health Sciences, University of the Witwatersrand, 9 jubilee Road, Parktown, Johannesburg 2193, South Africa.ORCID 0000-0002-1159-6482
Lyndon ZassComputational Biology Division, Department of Integrative Biomedical Sciences, IDM, CIDRI Africa Wellcome Trust Centre, University of Cape Town, Rondebosch, Cape Town 7701, South Africa.ORCID 0000-0001-8862-1706
Jorge E B da RochaSydney Brenner Institute for Molecular Bioscience, Faculty of Health Sciences, University of the Witwatersrand, 9 jubilee Road, Parktown, Johannesburg 2193, South Africa.ORCID 0000-0002-1386-5367
Fouzia RadouaniChlamydiae and Mycoplasma Laboratory, Research Department, Institut Pasteur du Maroc, Casablanca 20360, Morocco.
Chaimae SamtalLaboratory of Biotechnology, Environment, Agri-Food and Health, Faculty of Sciences Dhar El Mahraz, Sidi Mohammed Ben Abdellah University, Fez 30000, Morocco.ORCID 0000-0003-4899-7463
Ichrak BenamriChlamydiae and Mycoplasma Laboratory, Research Department, Institut Pasteur du Maroc, Casablanca 20360, Morocco.ORCID 0000-0001-8852-3460
Judit KumuthiniSouth African Bioinformatics Institute, University of Western Cape, Cape Town 7535, South Africa.ORCID 0000-0002-8008-1917
Yasmina J FakimBiotechnology Unit, Department of Agricultural and Food Science, Faculty of Agriculture, University of Mauritius, Reduit 80837, Mauritius.ORCID 0000-0001-7560-2178
Yosr HamdiLaboratory of Biomedical Genomics and Oncogenetics, LR20IPT05, Institut Pasteur de Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.ORCID 0000-0002-2815-1834
Nessrine MezziLaboratory of Biomedical Genomics and Oncogenetics, LR20IPT05, Institut Pasteur de Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.ORCID 0000-0002-0520-5078
Maroua BoujemaaLaboratory of Biomedical Genomics and Oncogenetics, LR20IPT05, Institut Pasteur de Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.ORCID 0000-0001-7409-9240
Chiamaka Jessica OkekeResearch Unit in Bioinformatics (RUBi), Department of Biochemistry and Microbiology, Rhodes University, Makhanda 6139, South Africa.ORCID 0000-0001-5838-5423
Maureen B TendwaResearch Unit in Bioinformatics (RUBi), Department of Biochemistry and Microbiology, Rhodes University, Makhanda 6139, South Africa.ORCID 0000-0002-2279-3326
Kholoud SanakChlamydiae and Mycoplasma Laboratory, Research Department, Institut Pasteur du Maroc, Casablanca 20360, Morocco.ORCID 0000-0003-2539-0837
Melek ChaouchLaboratory of Bioinformatics, Biomathematics and Biostatistics, Pasteur Institute of Tunisia, University of Tunis El Manar, Tunis 1068, Tunisia.ORCID 0000-0001-5868-4204
Sumir PanjiComputational Biology Division, Department of Integrative Biomedical Sciences, IDM, CIDRI Africa Wellcome Trust Centre, University of Cape Town, Rondebosch, Cape Town 7701, South Africa.ORCID 0000-0003-0447-0598
Rym KefiLaboratory of Biomedical Genomics and Oncogenetics, LR20IPT05, Institut Pasteur de Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.ORCID 0000-0001-8801-5781
Reem M SallamBasic Medical Science Department, Faculty of Medicine, Galala University, Suez 43727, Egypt.ORCID 0000-0002-5814-4811
Anisah W GhoorahDepartment of Digital Technologies, Faculty of Information, Communication and Digital Technologies, University of Mauritius, Reduit 80837, Mauritius.
Lilia RomdhaneLaboratory of Biomedical Genomics and Oncogenetics, LR20IPT05, Institut Pasteur de Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.ORCID 0000-0001-5310-7272
Anmol KiranMalawi-Liverpool-Wellcome Trust, Queen Elizabeth Central Hospital, College of Medicine, Blantyre P.O. Box 30096, Malawi.
Ayton P MeintjesComputational Biology Division, Department of Integrative Biomedical Sciences, IDM, CIDRI Africa Wellcome Trust Centre, University of Cape Town, Rondebosch, Cape Town 7701, South Africa.ORCID 0000-0001-5076-2941
Perceval MaturureComputational Biology Division, Department of Integrative Biomedical Sciences, IDM, CIDRI Africa Wellcome Trust Centre, University of Cape Town, Rondebosch, Cape Town 7701, South Africa.ORCID 0000-0002-6077-533X
Haifa JmelLaboratory of Biomedical Genomics and Oncogenetics, LR20IPT05, Institut Pasteur de Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.
Ayoub KsouriLaboratory of Venoms and Therapeutic Molecules (LR16IPT08), 1" Place Pasteur, BP74, Pasteur Institute of Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.
Maryame AzzouziChlamydiae and Mycoplasma Laboratory, Research Department, Institut Pasteur du Maroc, Casablanca 20360, Morocco.
Mohammed A FarahatCompute Science Department, The Higher Future Institute for Specialized Technological Studies, Cairo 11381, Egypt.ORCID 0000-0003-2443-2011
Samah AhmedCentre for Bioinformatics and Systems Biology, Faculty of Science, University of Khartoum, Khartoum 11115, Sudan.ORCID 0000-0002-1782-7624
Rania SibiraCentre for Bioinformatics and Systems Biology, Faculty of Science, University of Khartoum, Khartoum 11115, Sudan.ORCID 0000-0001-9361-7787
Michael E E TurksonNational Institute for Mathematical Sciences, PMB Kwame Nkrumah University of Science and Technology (KNUST), Kumasi, Ghana.ORCID 0000-0003-4036-4338
Alfred SsekagiriDivision of Entomology and Core Molecular Biology, Bioinformatics Facility, Uganda Virus Research Institute, Entebbe P.O. Box 49, Uganda.ORCID 0000-0002-6549-3550
Ziyaad ParkerComputational Biology Division, Department of Integrative Biomedical Sciences, IDM, CIDRI Africa Wellcome Trust Centre, University of Cape Town, Rondebosch, Cape Town 7701, South Africa.
Faisal M FadlelmolaCentre for Bioinformatics and Systems Biology, Faculty of Science, University of Khartoum, Khartoum 11115, Sudan.ORCID 0000-0001-8351-264X
Kais GhediraLaboratory of Bioinformatics, Biomathematics and Biostatistics, Pasteur Institute of Tunisia, University of Tunis El Manar, Tunis 1068, Tunisia.ORCID 0000-0002-3387-6493
Nicola MulderComputational Biology Division, Department of Integrative Biomedical Sciences, IDM, CIDRI Africa Wellcome Trust Centre, University of Cape Town, Rondebosch, Cape Town 7701, South Africa.ORCID 0000-0003-4905-0941
Samar Kamal KassimMedical Biochemistry and Molecular Biology Department, Faculty of Medicine, Ain Shams University, Cairo 11381, Egypt.ORCID 0000-0002-4359-6620
Tunis University · TNUniversity of Cape Town · ZAInstitut Pasteur du Maroc · MAUniversity of Khartoum · SDAin Shams University · EGInstitut Pasteur de Tunis · TNRhodes University · ZAUniversity of Mauritius · MUAbdelmalek Essaâdi University · MAKwame Nkrumah University of Science and Technology · GHNational Health Laboratory Service · ZASidi Mohamed Ben Abdellah University · MAUganda Virus Research Institute · UGUniversity of Liverpool · GBUniversity of the Western Cape · ZAUniversity of the Witwatersrand · ZA
Funding
H3ABioNet: informatics solutions for H3AfricaU24HG006941 · NHGRI · UNIVERSITY OF CAPE TOWN · PI MULDER, NICOLA · 2017 to 2021
$12.9M
NHGRI NIH HHS U24HG006941
6 · The paper itself
Abstract
Genomics data are currently being produced at unprecedented rates, resulting in increased knowledge discovery and submission to public data repositories. Despite these advances, genomic information on African-ancestry populations remains significantly low compared with European- and Asian-ancestry populations. This information is typically segmented across several different biomedical data repositories, which often lack sufficient fine-grained structure and annotation to account for the diversity of African populations, leading to many challenges related to the retrieval, representation and findability of such information. To overcome these challenges, we developed the African Genomic Medicine Portal (AGMP), a database that contains metadata on genomic medicine studies conducted on African-ancestry populations. The metadata is curated from two public databases related to genomic medicine, PharmGKB and DisGeNET. The metadata retrieved from these source databases were limited to genomic variants that were associated with disease aetiology or treatment in the context of African-ancestry populations. Over 2000 variants relevant to populations of African ancestry were retrieved. Subsequently, domain experts curated and annotated additional information associated with the studies that reported the variants, including geographical origin, ethnolinguistic group, level of association significance and other relevant study information, such as study design and sample size, where available. The AGMP functions as a dedicated resource through which to access African-specific information on genomics as applied to health research, through querying variants, genes, diseases and drugs. The portal and its corresponding technical documentation, implementation code and content are publicly available.
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.
African Genomic Medicine Portal: A Web Portal for Biomedical Applications. · full record | OpenQuestion