Evidence map›Paper›PMID 35202431›Full record

ArticlePloS one2022

Detection of EGFR mutations in non-small cell lung cancer by droplet digital PCR.

Drew F K Williamson, Sean R N Marris, Vanesa Rojas-Rudilla, Jacqueline L Bruce, Cloud P Paweletz, Geoffrey R Oxnard, Lynette M Sholl, Fei Dong

Open access · goldAbstract readValidation Study
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Diagnostic accuracy of next-generation sequencing (NGS) for identifying actionable mutations in advanced non-small cell lung cancer: Systematic Review and Meta-Analysis.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Drew F K WilliamsonDepartment of Pathology, Brigham and Women's Hospital, Boston, MA, United States of America.ORCID 0000-0003-1745-8846
Sean R N MarrisDepartment of Pathology, Brigham and Women's Hospital, Boston, MA, United States of America.
Vanesa Rojas-RudillaDepartment of Pathology, Brigham and Women's Hospital, Boston, MA, United States of America.
Jacqueline L BruceDepartment of Pathology, Brigham and Women's Hospital, Boston, MA, United States of America.
Cloud P PaweletzDepartment of Medical Oncology, Dana Farber Cancer Institute, Boston, MA, United States of America.
Geoffrey R OxnardDepartment of Medical Oncology, Dana Farber Cancer Institute, Boston, MA, United States of America.
Lynette M ShollDepartment of Pathology, Brigham and Women's Hospital, Boston, MA, United States of America.
Fei DongDepartment of Pathology, Brigham and Women's Hospital, Boston, MA, United States of America.ORCID 0000-0003-3769-0247
Brigham and Women's Hospital · USDana-Farber Cancer Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activating mutations in EGFR predict benefit from tyrosine kinase inhibitor therapy for patients with advanced non-small cell lung cancer. Directing patients to appropriate therapy depends on accurate and timely EGFR assessment in the molecular pathology laboratory. This article describes the analytical design, performance characteristics, and clinical implementation of an assay for the rapid detection of EGFR L858R and exon 19 deletion mutations. A droplet digital polymerase chain reaction (ddPCR) assay was implemented with probe hydrolysis-dependent signal detection. A mutation-specific probe was used to detect EGFR L858R. A loss of signal design was used to detect EGFR exon 19 deletion mutations. Analytical sensitivity was dependent on DNA input and was as low as 0.01% variant allele fraction for the EGFR L858R assay and 0.1% variant allele fraction for the EGFR exon 19 deletion assay. Correlation of 20 clinical specimens tested by ddPCR and next generation sequencing showed 100% concordance. ddPCR showed 53% clinical sensitivity in the detection of EGFR mutations in plasma cell-free DNA from patients with lung cancer. The median clinical turnaround time was 5 days for ddPCR compared to 13 days for next generation sequencing. The findings show that ddPCR is an accurate and rapid method for detecting EGFR mutations in patients with non-small cell lung cancer.

Indexed as

Carcinoma, Non-Small-Cell LungDNA Mutational AnalysisErbB ReceptorsHumansLung NeoplasmsMutationPolymerase Chain ReactionSensitivity and SpecificityEGFR protein, humanErbB Receptors

Identifiers

PMID35202431
PMCPMC8870499
OpenAlexW4213452252

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.