Evidence map›Paper›PMID 35201505›Full record

ArticleDiscover oncology2022

Slug and Vimentin downregulation at the metastatic site is associated with Skip-N2 metastasis of lung adenocarcinoma.

Yasemin Saygideger, Alper Avci, Emine Bagir, Burcu Saygıdeğer Demir, Aycan Sezan, Mucahit Ekici, Oya Baydar, Özgür Cem Erkin

Open access · goldAbstract read
In one paragraph

Article in Discover oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yasemin Saygideger *Department of Pulmonary, Cukurova University School of Medicine, Adana, Turkey. ysaygideger@cu.edu.tr.ORCID http://orcid.org/0000-0003-3293-373X
Alper Avci *Department of Thoracic Surgery, Cukurova University School of Medicine, Adana, Turkey.ORCID http://orcid.org/0000-0001-9337-3030
Emine BagirDepartment of Pathology, School of Medicine, Cukurova University, Adana, Turkey.ORCID http://orcid.org/0000-0002-1447-1060
Burcu Saygıdeğer DemirDepartment of Biotechnology, Institute of Natural and Applied Sciences, Cukurova University, Adana, Turkey.ORCID http://orcid.org/0000-0001-5179-0522
Aycan SezanDepartment of Biotechnology, Institute of Natural and Applied Sciences, Cukurova University, Adana, Turkey.ORCID http://orcid.org/0000-0003-1506-7083
Mucahit EkiciDepartment of Pulmonary, Cukurova University School of Medicine, Adana, Turkey.ORCID http://orcid.org/0000-0002-1803-0000
Oya BaydarDepartment of Pulmonary, Cukurova University School of Medicine, Adana, Turkey.ORCID http://orcid.org/0000-0001-7320-976X
Özgür Cem ErkinDepartment of Bioengineering, Faculty of Engineering, Adana Alparslan Türkeş Science and Technology University, Adana, Turkey.ORCID http://orcid.org/0000-0001-9818-3447
Cukurova University · TRAdana Science and Technology University · TR

Funding

Cukurova University TSA-2019-11506
6 · The paper itself

Abstract

objectiveLung cancer displays heterogeneity both in the tumor itself and in its metastatic regions. One interesting behavior of the tumor is known as Skip N2 metastasis, which N2 lymph nodes contain tumor cells while N1 are clean. In this study, mRNA levels of epithelial mesenchymal transition (EMT) related genes in skip N2 and normal N2 involvements of non-small cell lung cancer tissues were investigated to evaluate the possible molecular background that may contribute to the pathogenesis of Skip N2 metastasis. MATERIALS AND

methodsEighty-three surgically resected and paraffin embedded lymph node samples of lung cancer patients were analyzed in this study, which 40 of them were Skip N2. N2 tissues were sampled from 50% tumor containing areas and total RNA was extracted. mRNA levels for 18S, E-cadherin, Vimentin, ZEB1 and SLUG were analyzed via qPCR and E-cadherin and vimentin protein levels via immunohistochemistry (IHC). Bioinformatic analysis were adopted using online datasets to evaluate significantly co-expressed genes with SLUG in lung cancer tissue samples.

resultsSkip-N2 patients who had adenocarcinoma subtype had better survival rates. Comparative analysis of PCR results indicated that Skip N2 tumor tissues had increased E-Cadherin/Vimentin ratio and ZEB1 mRNA expression, and significantly decreased levels of SLUG. E-cadherin IHC staining were higher in Skip N2 and Vimentin were in Non-Skip N2. TP63 had a strong correlation with SLUG expression in the bioinformatics analyses.

conclusionThe results indicate that, at molecular level, Skip N2 pathogenesis has different molecular background and regulation of SLUG expression may orchestrate the process.

Indexed as

EMTLung cancerSkip N2SLUGTP63

Identifiers

PMID35201505
PMCPMC8783939
OpenAlexW4225922589

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.