Evidence map›Paper›PMID 35201278›Full record

ArticleGenome biology and evolution2022

Genomic Sequence and Transcriptome Analysis of the Medicinal Fungus Keithomyces neogunnii.

Liangkun Long, Zhen Liu, Chunying Deng, Chuanhua Li, Liangliang Wu, Beiwei Hou, Qunying Lin

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Transcriptome Analysis ofFoods (Basel, Switzerland) · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Liangkun LongJiangsu Co-Innovation Centre for Efficient Processing and Utilisation of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, China.
Zhen LiuJiangsu Co-Innovation Centre for Efficient Processing and Utilisation of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, China.
Chunying DengGuizhou Institute of Biology, Guizhou Academy of Sciences, Guiyang, China.
Chuanhua LiKey Laboratory of Applied Mycological Resources and Utilisation, Ministry of Agriculture, National Engineering Research Centre of Edible Fungi, Shanghai Key Laboratory of Agricultural Genetics and Breeding, Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, China.
Liangliang WuNanjing Institute for the Comprehensive Utilisation of Wild Plants, China.
Beiwei HouNanjing Institute for the Comprehensive Utilisation of Wild Plants, China.
Qunying LinNanjing Institute for the Comprehensive Utilisation of Wild Plants, China.
Guizhou Institute of Biology · CNInstitute of Chemical Industry of Forest Products · CNNanjing Forestry University · CNShanghai Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The filamentous fungus Keithomyces neogunnii can infect the larvae of Lepidoptera (Hepialus sp.) and form an insect-fungi complex, which is utilized as an important traditional Chinese medicine. As a valuable medicinal fungus, K. neogunnii produces diverse bioactive substances (e.g., polysaccharide, vitamins, cordycepic acid, and adenosine) under cultivation conditions. Herein, we report the first high-quality genome of the K. neogunnii single-spore isolate Cg7.2a using single-molecule real-time sequencing technology in combination with Illumina sequencing. The assembled genome was 32.6 Mb in size, containing 8,641 predicted genes and having a GC content of 52.16%. RNA sequencing analysis revealed the maximum number of differentially expressed genes in the fungus during the stroma formation stage compared with those during the mycelium stage. These data are valuable to enhance our understanding of the biology, development, evolution, and physiological metabolism of K. neogunnii.

Indexed as

Gene Expression ProfilingHypocrealesGenomicsMolecular Sequence AnnotationMyceliumSequence Analysis, RNATranscriptomefunctional annotationKeithomyces neogunniimedicinal fungustranscriptome analysis

Identifiers

PMID35201278
PMCPMC8907406
OpenAlexW4213444071

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.