Evidence map›Paper›PMID 35199893›Full record

ArticleThe Plant journal : for cell and molecular biology2022

A revised view on the evolution of glutamine synthetase isoenzymes in plants.

José Miguel Valderrama-Martín, Francisco Ortigosa, Concepción Ávila, Francisco M Cánovas, Bertrand Hirel, Francisco R Cantón, Rafael A Cañas

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

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  15. Nitrogen transport and assimilation in tea plant (Frontiers in plant science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

José Miguel Valderrama-MartínGrupo de Biología Molecular y Biotecnología, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Campus Universitario de Teatinos, 29071, Málaga, Spain.ORCID 0000-0003-1350-899X
Francisco OrtigosaGrupo de Biología Molecular y Biotecnología, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Campus Universitario de Teatinos, 29071, Málaga, Spain.ORCID 0000-0002-7517-7594
Concepción ÁvilaGrupo de Biología Molecular y Biotecnología, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Campus Universitario de Teatinos, 29071, Málaga, Spain.ORCID 0000-0001-8817-7529
Francisco M CánovasGrupo de Biología Molecular y Biotecnología, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Campus Universitario de Teatinos, 29071, Málaga, Spain.ORCID 0000-0002-4914-2558
Bertrand HirelInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Centre de Versailles-Grignon, RD 10, 78026, Versailles Cedex, France.ORCID 0000-0002-5518-3671
Francisco R CantónIntegrative Molecular Biology Lab, Universidad de Málaga, Campus Universitario de Teatinos, 29071, Málaga, Spain.ORCID 0000-0001-6917-8630
Rafael A CañasIntegrative Molecular Biology Lab, Universidad de Málaga, Campus Universitario de Teatinos, 29071, Málaga, Spain.ORCID 0000-0001-9727-5585
Universidad de Málaga · ESInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutamine synthetase (GS) is a key enzyme responsible for the incorporation of inorganic nitrogen in the form of ammonium into the amino acid glutamine. In plants, two groups of functional GS enzymes are found: eubacterial GSIIb (GLN2) and eukaryotic GSIIe (GLN1/GS). Only GLN1/GS genes are found in vascular plants, which suggests that they are involved in the final adaptation of plants to terrestrial life. The present phylogenetic study reclassifies the different GS genes of seed plants into three clusters: GS1a, GS1b and GS2. The presence of genes encoding GS2 has been expanded to Cycadopsida gymnosperms, which suggests the origin of this gene in a common ancestor of Cycadopsida, Ginkgoopsida and angiosperms. GS1a genes have been identified in all gymnosperms, basal angiosperms and some Magnoliidae species. Previous studies in conifers and the gene expression profiles obtained in ginkgo and magnolia in the present work could explain the absence of GS1a in more recent angiosperm species (e.g. monocots and eudicots) as a result of the redundant roles of GS1a and GS2 in photosynthetic cells. Altogether, the results provide a better understanding of the evolution of plant GS isoenzymes and their physiological roles, which is valuable for improving crop nitrogen use efficiency and productivity. This new view of GS evolution in plants, including a new cytosolic GS group (GS1a), has important functional implications in the context of plant metabolism adaptation to global changes.

Indexed as

Glutamate-Ammonia LigaseTracheophytaCycadopsidaIsoenzymesNitrogenPhylogenyGlutamate-Ammonia LigaseIsoenzymesNitrogenadaptationglutamine synthetasenew gene classificationnitrogen metabolismphylogenyplant evolution

Identifiers

PMID35199893
PMCPMC9310647
OpenAlexW4213444750

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.