Evidence map›Paper›PMID 35199644›Full record

ArticleeLife2022

Colicin E1 opens its hinge to plug TolC.

S Jimmy Budiardjo, Jacqueline J Stevens, Anna L Calkins, Ayotunde P Ikujuni, Virangika K Wimalasena, Emre Firlar, David A Case, Julie S Biteen, Jason T Kaelber, Joanna S G Slusky

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. The Role of Selected Bacteria in Breast Cancer Initiation and Development.International journal of molecular sciences · 2026
    Review
  4. Article
  5. Purification and Sonication-Assisted Cryo-EM Grid Preparation of TolC.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Cryo-electron microscopy-based drug design.Frontiers in molecular biosciences · 2024
    Review
  14. Article
  15. Article
  16. A coevolution experiment betweenMicrobiology (Reading, England) · 2023
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

S Jimmy BudiardjoCenter for Computational Biology, The University of Kansas, Lawrence, United States.ORCID 0000-0003-2094-9179
Jacqueline J StevensDepartment of Molecular Biosciences, The University of Kansas, Lawrence, United States.ORCID 0000-0003-2235-0522
Anna L CalkinsDepartment of Chemistry, University of Michigan, Ann Arbor, United States.
Ayotunde P IkujuniDepartment of Molecular Biosciences, The University of Kansas, Lawrence, United States.ORCID 0000-0001-8951-3440
Virangika K WimalasenaDepartment of Molecular Biosciences, The University of Kansas, Lawrence, United States.ORCID 0000-0002-1061-3439
Emre FirlarRutgers CryoEM & Nanoimaging Facility and Institute for Quantitative Biomedicine, Rutgers University, Piscataway, United States.ORCID 0000-0003-0190-6528
David A CaseDepartment of Chemistry and Chemical Biology, Rutgers University, Piscataway, United States.
Julie S BiteenDepartment of Chemistry, University of Michigan, Ann Arbor, United States.ORCID 0000-0003-2038-6484
Jason T KaelberRutgers CryoEM & Nanoimaging Facility and Institute for Quantitative Biomedicine, Rutgers University, Piscataway, United States.ORCID 0000-0001-9426-1030
Joanna S G SluskyCenter for Computational Biology, The University of Kansas, Lawrence, United States.ORCID 0000-0003-0842-6340
University of Kansas · USRutgers, The State University of New Jersey · USUniversity of Michigan · USRutgers Sexual and Reproductive Health and Rights · NL

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Douglas E Wright · 2012 to 2026
$63.0M
Synthetic Chemical Biology CoreP20GM113117 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI OROZCO, ROBIN C. · 2016 to 2025
$23.9M
Understanding the mechanobiology of stem cells in a microengineered 3D cardiac tissue environment with cardiomyopathyP20GM103638 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI LUNTE, SUSAN M · 2012 to 2021
$22.1M
U of Kansas/Haskell Indian Nations U.IRACDA ProjectK12GM063651 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI DE GUZMAN, ROBERTO N · 2002 to 2022
$10.0M
DESIGNED BETA-STRANDS FOR INHIBITING EFFLUX PUMPS AND DISABLING ANTIBIOTIC RESISTANCEDP2GM128201 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI SLUSKY, JOANNA SG · 2017 to 2017
$2.3M
Tools for Creating a Super-Resolution Interaction Map of Subcellular Dynamics in Living Bacteria CellsR21GM128022 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BITEEN, JULIE · 2018 to 2019
$408k
NIGMS NIH HHS DP2 GM128201NIGMS NIH HHS K12 GM063651NIGMS NIH HHS P20 GM103418NIGMS NIH HHS P20 GM103638NIGMS NIH HHS P20 GM113117NIGMS NIH HHS R21 GM128022
6 · The paper itself

Abstract

The double membrane architecture of Gram-negative bacteria forms a barrier that is impermeable to most extracellular threats. Bacteriocin proteins evolved to exploit the accessible, surface-exposed proteins embedded in the outer membrane to deliver cytotoxic cargo. Colicin E1 is a bacteriocin produced by, and lethal to,

Indexed as

BacteriocinsColicinsEscherichia coli ProteinsAnti-Bacterial AgentsBacterial Outer Membrane ProteinsCryoelectron MicroscopyEscherichia coliMembrane Transport ProteinsProtein TransportAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBacteriocinsColicinsEscherichia coli ProteinsMembrane Transport Proteinsantibiotic effluxantibiotic resistancecolicincolicin E1E. coliinfectious diseasemicrobiologymolecular biophysicsstructural biologyTolC

Identifiers

PMID35199644
PMCPMC9020818
OpenAlexW4213425437

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.