Evidence map›Paper›PMID 35197633›Full record

ArticleNature2022

The bacterial toxin colibactin triggers prophage induction.

Justin E Silpe, Joel W H Wong, Siân V Owen, Michael Baym, Emily P Balskus

Open access · hybridAbstract read
In one paragraph

Article in Nature, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
20.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 120 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Revisiting the life cycle of temperate phages.Nature reviews. Microbiology · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Remodelling of the gut virome after long-term fasting.NPJ biofilms and microbiomes · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Justin E Silpe *Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-6264-8553
Joel W H Wong *Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.
Siân V OwenDepartment of Biomedical Informatics and Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-5330-3177
Michael BaymDepartment of Biomedical Informatics and Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-1303-5598
Emily P BalskusDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA. balskus@chemistry.harvard.edu.ORCID http://orcid.org/0000-0001-5985-5714
Harvard University · USHoward Hughes Medical Institute · US

Funding

Understanding the Mechanism of a Gut Microbial Genotoxin Involved in Colorectal CarcinogenesisR01CA208834 · NCI · HARVARD UNIVERSITY · PI BALSKUS, EMILY PATRICIA · 2016 to 2025
$3.7M
Evolutionary Tradeoffs in Antibiotic ResistanceR35GM133700 · NIGMS · HARVARD MEDICAL SCHOOL · PI BAYM, MICHAEL · 2019 to 2023
$2.4M
NCI NIH HHS R01 CA208834NIGMS NIH HHS R35 GM133700
6 · The paper itself

Abstract

Colibactin is a chemically unstable small-molecule genotoxin that is produced by several different bacteria, including members of the human gut microbiome

Indexed as

BacteriaBacterial ToxinsPeptidesPolyketidesProphagesVirus ActivationBacteriolysisMicrobial InteractionsSOS Response, GeneticsBacterial ToxinscolibactinPeptidesPolyketides

Identifiers

PMID35197633
PMCPMC8907063
OpenAlexW4213096651

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.