Evidence map›Paper›PMID 35197472›Full record

ArticleNature communications2022

Small Cajal body-associated RNA 2 (scaRNA2) regulates DNA repair pathway choice by inhibiting DNA-PK.

Sofie Bergstrand, Eleanor M O'Brien, Christos Coucoravas, Dominika Hrossova, Dimitra Peirasmaki, Sandro Schmidli, Soniya Dhanjal, Chiara Pederiva, Lee Siggens, Oliver Mortusewicz and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Sofie Bergstrand *Department of Biosciences and Nutrition, Neo, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0003-1879-8623
Eleanor M O'Brien *Department of Cell and Molecular biology, Biomedicum, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-5375-459X
Christos CoucoravasDepartment of Cell and Molecular biology, Biomedicum, Karolinska Institutet, Stockholm, Sweden.
Dominika HrossovaDepartment of Cell and Molecular biology, Biomedicum, Karolinska Institutet, Stockholm, Sweden.
Dimitra PeirasmakiDepartment of Cell and Molecular biology, Biomedicum, Karolinska Institutet, Stockholm, Sweden.
Sandro SchmidliDepartment of Cell and Molecular biology, Biomedicum, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0001-6538-3581
Soniya DhanjalDepartment of Cell and Molecular biology, Biomedicum, Karolinska Institutet, Stockholm, Sweden.
Chiara PederivaDepartment of Cell and Molecular biology, Biomedicum, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-9682-8405
Lee SiggensDepartment of Biosciences and Nutrition, Neo, Karolinska Institutet, Stockholm, Sweden.
Oliver MortusewiczDepartment of Oncology and Pathology, SciLife, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-4290-4994
Julienne J O'RourkeDepartment of Cell and Molecular biology, Biomedicum, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-8816-0265
Marianne FarneboDepartment of Biosciences and Nutrition, Neo, Karolinska Institutet, Stockholm, Sweden. marianne.farnebo@ki.se.ORCID http://orcid.org/0000-0002-2677-558X
Karolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Evidence that long non-coding RNAs (lncRNAs) participate in DNA repair is accumulating, however, whether they can control DNA repair pathway choice is unknown. Here we show that the small Cajal body-specific RNA 2 (scaRNA2) can promote HR by inhibiting DNA-dependent protein kinase (DNA-PK) and, thereby, NHEJ. By binding to the catalytic subunit of DNA-PK (DNA-PKcs), scaRNA2 weakens its interaction with the Ku70/80 subunits, as well as with the LINP1 lncRNA, thereby preventing catalytic activation of the enzyme. Inhibition of DNA-PK by scaRNA2 stimulates DNA end resection by the MRN/CtIP complex, activation of ATM at DNA lesions and subsequent repair by HR. ScaRNA2 is regulated in turn by WRAP53β, which binds this RNA, sequestering it away from DNA-PKcs and allowing NHEJ to proceed. These findings reveal that RNA-dependent control of DNA-PK catalytic activity is involved in regulating whether the cell utilizes NHEJ or HR.

Indexed as

Protein KinasesRNADNADNA-Activated Protein KinaseDNA-Binding ProteinsDNA End-Joining RepairDNA RepairKu AutoantigenDNADNA-Activated Protein KinaseDNA-Binding ProteinsKu AutoantigenProtein KinasesRNA

Identifiers

PMID35197472
PMCPMC8866460
OpenAlexW4214760148

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.